Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
UBE2D3P61077 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.04□□□□□ -0.16
UBE2D3P61077 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBE2D3P61077 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
UBE2D3P61077 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.04□□□□□ -0.16
UBE2D3P61077 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.04□□□□□ -0.16
UBE2D3P61077 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBE2D3P61077 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.04□□□□□ -0.16
UBE2D3P61077 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBE2D3P61077 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBE2D3P61077 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBE2D3P61077 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
UBE2D3P61077 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
UBE2D3P61077 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.04□□□□□ -0.16
UBE2D3P61077 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.04□□□□□ -0.16
UBE2D3P61077 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBE2D3P61077 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
UBE2D3P61077 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
UBE2D3P61077 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.04□□□□□ -0.16
UBE2D3P61077 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBE2D3P61077 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
UBE2D3P61077 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
UBE2D3P61077 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
UBE2D3P61077 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.03□□□□□ -0.16
UBE2D3P61077 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
UBE2D3P61077 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC14.03□□□□□ -0.16
UBE2D3P61077 DUX4L16-201ENST00000555130 1264 ntBASIC14.03□□□□□ -0.16
UBE2D3P61077 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.03□□□□□ -0.16
UBE2D3P61077 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
UBE2D3P61077 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.03□□□□□ -0.16
UBE2D3P61077 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
UBE2D3P61077 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.03□□□□□ -0.16
UBE2D3P61077 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.03□□□□□ -0.16
UBE2D3P61077 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.03□□□□□ -0.16
UBE2D3P61077 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC14.03□□□□□ -0.16
UBE2D3P61077 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.03□□□□□ -0.16
UBE2D3P61077 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBE2D3P61077 LTB4R2-202ENST00000528054 3092 ntBASIC14.03□□□□□ -0.16
UBE2D3P61077 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2D3P61077 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2D3P61077 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.02□□□□□ -0.16
UBE2D3P61077 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2D3P61077 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2D3P61077 PTBP1P-201ENST00000554374 1601 ntBASIC14.02□□□□□ -0.16
UBE2D3P61077 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
UBE2D3P61077 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.02□□□□□ -0.16
UBE2D3P61077 AC068338.2-201ENST00000563278 1430 ntBASIC14.02□□□□□ -0.16
UBE2D3P61077 CNN2P6-201ENST00000439038 900 ntBASIC14.02□□□□□ -0.17
UBE2D3P61077 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.02□□□□□ -0.17
UBE2D3P61077 AC105020.6-201ENST00000621523 1217 ntBASIC14.02□□□□□ -0.17
UBE2D3P61077 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.02□□□□□ -0.17
UBE2D3P61077 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2D3P61077 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2D3P61077 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2D3P61077 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.02□□□□□ -0.17
UBE2D3P61077 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2D3P61077 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
UBE2D3P61077 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2D3P61077 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2D3P61077 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
UBE2D3P61077 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UBE2D3P61077 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.01□□□□□ -0.17
UBE2D3P61077 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.01□□□□□ -0.17
UBE2D3P61077 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D3P61077 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D3P61077 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D3P61077 KRT8P17-201ENST00000453110 1448 ntBASIC14.01□□□□□ -0.17
UBE2D3P61077 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC14.01□□□□□ -0.17
UBE2D3P61077 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D3P61077 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
UBE2D3P61077 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D3P61077 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D3P61077 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UBE2D3P61077 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.01□□□□□ -0.17
UBE2D3P61077 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.01□□□□□ -0.17
UBE2D3P61077 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.01□□□□□ -0.17
UBE2D3P61077 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.01□□□□□ -0.17
UBE2D3P61077 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.01□□□□□ -0.17
UBE2D3P61077 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.01□□□□□ -0.17
UBE2D3P61077 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms