Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VSX2P58304 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VSX2P58304 AIRN-201ENST00000601203 4374 ntBASIC18.91■□□□□ 0.62
VSX2P58304 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VSX2P58304 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
VSX2P58304 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VSX2P58304 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.9■□□□□ 0.62
VSX2P58304 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VSX2P58304 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
VSX2P58304 PHGDH-210ENST00000641115 1638 ntBASIC18.9■□□□□ 0.62
VSX2P58304 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
VSX2P58304 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.9■□□□□ 0.62
VSX2P58304 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.9■□□□□ 0.62
VSX2P58304 UBE2SP1-201ENST00000450587 669 ntBASIC18.9■□□□□ 0.62
VSX2P58304 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VSX2P58304 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.9■□□□□ 0.62
VSX2P58304 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.9■□□□□ 0.62
VSX2P58304 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.9■□□□□ 0.62
VSX2P58304 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.9■□□□□ 0.62
VSX2P58304 AC110285.5-201ENST00000611501 352 ntBASIC18.9■□□□□ 0.62
VSX2P58304 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.9■□□□□ 0.62
VSX2P58304 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.9■□□□□ 0.62
VSX2P58304 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VSX2P58304 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
VSX2P58304 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
VSX2P58304 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VSX2P58304 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
VSX2P58304 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
VSX2P58304 AC018553.1-201ENST00000616682 1458 ntBASIC18.9■□□□□ 0.62
VSX2P58304 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VSX2P58304 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
VSX2P58304 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VSX2P58304 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VSX2P58304 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
VSX2P58304 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
VSX2P58304 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.89■□□□□ 0.61
VSX2P58304 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VSX2P58304 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VSX2P58304 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VSX2P58304 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VSX2P58304 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VSX2P58304 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
VSX2P58304 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VSX2P58304 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
VSX2P58304 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VSX2P58304 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.89■□□□□ 0.61
VSX2P58304 AC133681.1-201ENST00000465482 601 ntBASIC18.89■□□□□ 0.61
VSX2P58304 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.89■□□□□ 0.61
VSX2P58304 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VSX2P58304 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.89■□□□□ 0.61
VSX2P58304 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VSX2P58304 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VSX2P58304 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.89■□□□□ 0.61
VSX2P58304 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.89■□□□□ 0.61
VSX2P58304 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VSX2P58304 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
VSX2P58304 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VSX2P58304 AC116351.2-201ENST00000606540 1585 ntBASIC18.89■□□□□ 0.61
VSX2P58304 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VSX2P58304 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VSX2P58304 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.88■□□□□ 0.61
VSX2P58304 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.88■□□□□ 0.61
VSX2P58304 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VSX2P58304 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.88■□□□□ 0.61
VSX2P58304 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VSX2P58304 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.88■□□□□ 0.61
VSX2P58304 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.88■□□□□ 0.61
VSX2P58304 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.88■□□□□ 0.61
VSX2P58304 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
VSX2P58304 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.88■□□□□ 0.61
VSX2P58304 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VSX2P58304 AP006294.2-201ENST00000641667 209 ntBASIC18.88■□□□□ 0.61
VSX2P58304 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VSX2P58304 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
VSX2P58304 NBPF21P-201ENST00000425093 1451 ntBASIC18.88■□□□□ 0.61
VSX2P58304 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
VSX2P58304 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.88■□□□□ 0.61
VSX2P58304 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VSX2P58304 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.88■□□□□ 0.61
VSX2P58304 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
VSX2P58304 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
VSX2P58304 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VSX2P58304 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.88■□□□□ 0.61
VSX2P58304 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VSX2P58304 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VSX2P58304 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.88■□□□□ 0.61
VSX2P58304 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
VSX2P58304 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
VSX2P58304 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VSX2P58304 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.87■□□□□ 0.61
VSX2P58304 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
VSX2P58304 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VSX2P58304 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VSX2P58304 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.87■□□□□ 0.61
VSX2P58304 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
VSX2P58304 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VSX2P58304 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VSX2P58304 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
VSX2P58304 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VSX2P58304 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms