Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PMS2P54278 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PMS2P54278 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.36■□□□□ 0.85
PMS2P54278 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
PMS2P54278 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
PMS2P54278 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PMS2P54278 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.36■□□□□ 0.85
PMS2P54278 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PMS2P54278 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.36■□□□□ 0.85
PMS2P54278 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.36■□□□□ 0.85
PMS2P54278 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.36■□□□□ 0.85
PMS2P54278 AC026185.1-201ENST00000445748 174 ntBASIC20.36■□□□□ 0.85
PMS2P54278 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.36■□□□□ 0.85
PMS2P54278 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.36■□□□□ 0.85
PMS2P54278 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.36■□□□□ 0.85
PMS2P54278 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PMS2P54278 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.36■□□□□ 0.85
PMS2P54278 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PMS2P54278 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PMS2P54278 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PMS2P54278 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS2P54278 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.35■□□□□ 0.85
PMS2P54278 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS2P54278 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.35■□□□□ 0.85
PMS2P54278 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.35■□□□□ 0.85
PMS2P54278 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PMS2P54278 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS2P54278 KRT19P1-201ENST00000405746 1186 ntBASIC20.35■□□□□ 0.85
PMS2P54278 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.35■□□□□ 0.85
PMS2P54278 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.35■□□□□ 0.85
PMS2P54278 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.35■□□□□ 0.85
PMS2P54278 AP001160.3-201ENST00000601484 763 ntBASIC20.35■□□□□ 0.85
PMS2P54278 AC104187.1-201ENST00000607510 612 ntBASIC20.35■□□□□ 0.85
PMS2P54278 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.35■□□□□ 0.85
PMS2P54278 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.35■□□□□ 0.85
PMS2P54278 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS2P54278 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.35■□□□□ 0.85
PMS2P54278 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.35■□□□□ 0.85
PMS2P54278 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS2P54278 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS2P54278 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.35■□□□□ 0.85
PMS2P54278 RBM17P2-201ENST00000616397 1405 ntBASIC20.35■□□□□ 0.85
PMS2P54278 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
PMS2P54278 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS2P54278 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS2P54278 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS2P54278 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS2P54278 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PMS2P54278 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.34■□□□□ 0.85
PMS2P54278 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.34■□□□□ 0.85
PMS2P54278 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS2P54278 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS2P54278 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS2P54278 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS2P54278 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS2P54278 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PMS2P54278 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PMS2P54278 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS2P54278 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PMS2P54278 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PMS2P54278 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.34■□□□□ 0.85
PMS2P54278 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.34■□□□□ 0.85
PMS2P54278 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PMS2P54278 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS2P54278 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.34■□□□□ 0.85
PMS2P54278 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS2P54278 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS2P54278 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS2P54278 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS2P54278 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS2P54278 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMS2P54278 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.34■□□□□ 0.85
PMS2P54278 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PMS2P54278 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PMS2P54278 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PMS2P54278 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PMS2P54278 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.33■□□□□ 0.85
PMS2P54278 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PMS2P54278 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PMS2P54278 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PMS2P54278 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PMS2P54278 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.33■□□□□ 0.85
PMS2P54278 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.33■□□□□ 0.85
PMS2P54278 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.33■□□□□ 0.85
PMS2P54278 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.33■□□□□ 0.85
PMS2P54278 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.33■□□□□ 0.85
PMS2P54278 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.33■□□□□ 0.85
PMS2P54278 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PMS2P54278 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.33■□□□□ 0.85
PMS2P54278 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PMS2P54278 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
PMS2P54278 LINC01465-201ENST00000408887 1940 ntBASIC20.33■□□□□ 0.84
PMS2P54278 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PMS2P54278 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PMS2P54278 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PMS2P54278 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PMS2P54278 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMS2P54278 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
PMS2P54278 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMS2P54278 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms