Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
SRP9P49458 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.49■□□□□ 0.39
SRP9P49458 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.49■□□□□ 0.39
SRP9P49458 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRP9P49458 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SRP9P49458 AC093484.2-201ENST00000580996 2166 ntBASIC17.49■□□□□ 0.39
SRP9P49458 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
SRP9P49458 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SRP9P49458 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRP9P49458 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRP9P49458 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.48■□□□□ 0.39
SRP9P49458 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SRP9P49458 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SRP9P49458 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRP9P49458 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRP9P49458 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.48■□□□□ 0.39
SRP9P49458 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRP9P49458 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SRP9P49458 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.48■□□□□ 0.39
SRP9P49458 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.48■□□□□ 0.39
SRP9P49458 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRP9P49458 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRP9P49458 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
SRP9P49458 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.48■□□□□ 0.39
SRP9P49458 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SRP9P49458 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SRP9P49458 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.48■□□□□ 0.39
SRP9P49458 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.48■□□□□ 0.39
SRP9P49458 OR10C1-204ENST00000622521 1039 ntBASIC17.48■□□□□ 0.39
SRP9P49458 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SRP9P49458 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SRP9P49458 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRP9P49458 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRP9P49458 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.48■□□□□ 0.39
SRP9P49458 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRP9P49458 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SRP9P49458 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRP9P49458 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.47■□□□□ 0.39
SRP9P49458 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRP9P49458 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SRP9P49458 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRP9P49458 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.47■□□□□ 0.39
SRP9P49458 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SRP9P49458 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SRP9P49458 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.47■□□□□ 0.39
SRP9P49458 RARRES2P4-201ENST00000514074 484 ntBASIC17.47■□□□□ 0.39
SRP9P49458 AC090192.1-201ENST00000517740 490 ntBASIC17.47■□□□□ 0.39
SRP9P49458 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.47■□□□□ 0.39
SRP9P49458 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRP9P49458 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.47■□□□□ 0.39
SRP9P49458 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRP9P49458 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRP9P49458 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRP9P49458 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRP9P49458 AC007613.1-201ENST00000572811 2597 ntBASIC17.46■□□□□ 0.39
SRP9P49458 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.46■□□□□ 0.39
SRP9P49458 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRP9P49458 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.46■□□□□ 0.39
SRP9P49458 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRP9P49458 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRP9P49458 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRP9P49458 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
SRP9P49458 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRP9P49458 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SRP9P49458 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRP9P49458 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.46■□□□□ 0.39
SRP9P49458 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.46■□□□□ 0.39
SRP9P49458 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.46■□□□□ 0.39
SRP9P49458 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRP9P49458 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
SRP9P49458 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.46■□□□□ 0.39
SRP9P49458 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.46■□□□□ 0.39
SRP9P49458 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRP9P49458 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRP9P49458 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRP9P49458 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRP9P49458 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SRP9P49458 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRP9P49458 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRP9P49458 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRP9P49458 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
SRP9P49458 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRP9P49458 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SRP9P49458 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.45■□□□□ 0.38
SRP9P49458 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.45■□□□□ 0.38
SRP9P49458 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
SRP9P49458 AC005082.1-201ENST00000413042 2259 ntBASIC17.45■□□□□ 0.38
SRP9P49458 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SRP9P49458 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.45■□□□□ 0.38
SRP9P49458 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRP9P49458 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRP9P49458 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRP9P49458 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SRP9P49458 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SRP9P49458 CROCCP5-201ENST00000436658 830 ntBASIC17.45■□□□□ 0.38
SRP9P49458 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.45■□□□□ 0.38
SRP9P49458 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SRP9P49458 AC133552.2-202ENST00000575694 574 ntBASIC17.45■□□□□ 0.38
SRP9P49458 AC016405.3-201ENST00000607710 860 ntBASIC17.45■□□□□ 0.38
SRP9P49458 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms