Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA4P43681 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.95■□□□□ 0.78
CHRNA4P43681 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA4P43681 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CHRNA4P43681 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.95■□□□□ 0.78
CHRNA4P43681 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHRNA4P43681 AP001271.2-201ENST00000624018 1556 ntBASIC19.95■□□□□ 0.78
CHRNA4P43681 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.95■□□□□ 0.78
CHRNA4P43681 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.95■□□□□ 0.78
CHRNA4P43681 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CHRNA4P43681 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.94■□□□□ 0.78
CHRNA4P43681 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA4P43681 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA4P43681 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.94■□□□□ 0.78
CHRNA4P43681 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.94■□□□□ 0.78
CHRNA4P43681 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.94■□□□□ 0.78
CHRNA4P43681 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.94■□□□□ 0.78
CHRNA4P43681 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA4P43681 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA4P43681 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA4P43681 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.94■□□□□ 0.78
CHRNA4P43681 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHRNA4P43681 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.94■□□□□ 0.78
CHRNA4P43681 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.94■□□□□ 0.78
CHRNA4P43681 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.94■□□□□ 0.78
CHRNA4P43681 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA4P43681 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHRNA4P43681 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHRNA4P43681 AC116351.2-201ENST00000606540 1585 ntBASIC19.94■□□□□ 0.78
CHRNA4P43681 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.94■□□□□ 0.78
CHRNA4P43681 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CHRNA4P43681 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.94■□□□□ 0.78
CHRNA4P43681 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.94■□□□□ 0.78
CHRNA4P43681 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHRNA4P43681 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.93■□□□□ 0.78
CHRNA4P43681 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA4P43681 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA4P43681 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CHRNA4P43681 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA4P43681 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHRNA4P43681 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA4P43681 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA4P43681 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA4P43681 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.93■□□□□ 0.78
CHRNA4P43681 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.93■□□□□ 0.78
CHRNA4P43681 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.93■□□□□ 0.78
CHRNA4P43681 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.93■□□□□ 0.78
CHRNA4P43681 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.93■□□□□ 0.78
CHRNA4P43681 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.93■□□□□ 0.78
CHRNA4P43681 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
CHRNA4P43681 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA4P43681 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA4P43681 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA4P43681 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.93■□□□□ 0.78
CHRNA4P43681 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.93■□□□□ 0.78
CHRNA4P43681 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CHRNA4P43681 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA4P43681 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHRNA4P43681 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
CHRNA4P43681 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA4P43681 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.92■□□□□ 0.78
CHRNA4P43681 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.92■□□□□ 0.78
CHRNA4P43681 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA4P43681 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA4P43681 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.92■□□□□ 0.78
CHRNA4P43681 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA4P43681 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA4P43681 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA4P43681 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA4P43681 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CHRNA4P43681 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA4P43681 UNC93B5-201ENST00000530315 699 ntBASIC19.92■□□□□ 0.78
CHRNA4P43681 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.92■□□□□ 0.78
CHRNA4P43681 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA4P43681 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA4P43681 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA4P43681 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHRNA4P43681 TREX1-205ENST00000625293 1783 ntBASIC19.92■□□□□ 0.78
CHRNA4P43681 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.92■□□□□ 0.78
CHRNA4P43681 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.92■□□□□ 0.78
CHRNA4P43681 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA4P43681 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA4P43681 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA4P43681 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA4P43681 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA4P43681 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
CHRNA4P43681 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA4P43681 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA4P43681 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA4P43681 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA4P43681 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.91■□□□□ 0.78
CHRNA4P43681 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.91■□□□□ 0.78
CHRNA4P43681 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
CHRNA4P43681 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.91■□□□□ 0.78
CHRNA4P43681 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.91■□□□□ 0.78
CHRNA4P43681 KRT18P6-201ENST00000555540 1265 ntBASIC19.91■□□□□ 0.78
CHRNA4P43681 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.91■□□□□ 0.78
CHRNA4P43681 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.91■□□□□ 0.78
CHRNA4P43681 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.91■□□□□ 0.78
CHRNA4P43681 AC120498.8-201ENST00000614275 531 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms