Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDNFP39905 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
GDNFP39905 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.17■□□□□ 0.34
GDNFP39905 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.17■□□□□ 0.34
GDNFP39905 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
GDNFP39905 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDNFP39905 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
GDNFP39905 DPP3P2-201ENST00000416030 1696 ntBASIC17.16■□□□□ 0.34
GDNFP39905 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
GDNFP39905 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
GDNFP39905 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
GDNFP39905 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
GDNFP39905 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GDNFP39905 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.16■□□□□ 0.34
GDNFP39905 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
GDNFP39905 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GDNFP39905 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.16■□□□□ 0.34
GDNFP39905 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.16■□□□□ 0.34
GDNFP39905 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.16■□□□□ 0.34
GDNFP39905 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
GDNFP39905 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GDNFP39905 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
GDNFP39905 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GDNFP39905 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
GDNFP39905 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GDNFP39905 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.16■□□□□ 0.34
GDNFP39905 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GDNFP39905 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.16■□□□□ 0.34
GDNFP39905 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
GDNFP39905 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.16■□□□□ 0.34
GDNFP39905 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
GDNFP39905 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDNFP39905 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
GDNFP39905 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDNFP39905 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.15■□□□□ 0.34
GDNFP39905 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDNFP39905 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDNFP39905 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDNFP39905 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GDNFP39905 POU5F1P4-201ENST00000413175 1085 ntBASIC17.15■□□□□ 0.34
GDNFP39905 KRT18P5-201ENST00000436075 1291 ntBASIC17.15■□□□□ 0.34
GDNFP39905 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.15■□□□□ 0.34
GDNFP39905 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GDNFP39905 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.15■□□□□ 0.34
GDNFP39905 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDNFP39905 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.15■□□□□ 0.34
GDNFP39905 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDNFP39905 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDNFP39905 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDNFP39905 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDNFP39905 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GDNFP39905 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GDNFP39905 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDNFP39905 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GDNFP39905 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.15■□□□□ 0.34
GDNFP39905 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDNFP39905 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDNFP39905 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GDNFP39905 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GDNFP39905 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GDNFP39905 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.14■□□□□ 0.33
GDNFP39905 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.14■□□□□ 0.33
GDNFP39905 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.14■□□□□ 0.33
GDNFP39905 LINC01465-201ENST00000408887 1940 ntBASIC17.14■□□□□ 0.33
GDNFP39905 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.14■□□□□ 0.33
GDNFP39905 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
GDNFP39905 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GDNFP39905 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GDNFP39905 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.14■□□□□ 0.33
GDNFP39905 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.14■□□□□ 0.33
GDNFP39905 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.14■□□□□ 0.33
GDNFP39905 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GDNFP39905 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
GDNFP39905 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.14■□□□□ 0.33
GDNFP39905 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GDNFP39905 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.14■□□□□ 0.33
GDNFP39905 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GDNFP39905 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
GDNFP39905 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GDNFP39905 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
GDNFP39905 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.13■□□□□ 0.33
GDNFP39905 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.13■□□□□ 0.33
GDNFP39905 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
GDNFP39905 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GDNFP39905 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GDNFP39905 AL049812.1-201ENST00000432563 2267 ntBASIC17.13■□□□□ 0.33
GDNFP39905 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GDNFP39905 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
GDNFP39905 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
GDNFP39905 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
GDNFP39905 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GDNFP39905 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GDNFP39905 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GDNFP39905 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GDNFP39905 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.13■□□□□ 0.33
GDNFP39905 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
GDNFP39905 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GDNFP39905 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
GDNFP39905 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GDNFP39905 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms