Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ATP6V1AP38606 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.28■■□□□ 1.64
ATP6V1AP38606 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
ATP6V1AP38606 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
ATP6V1AP38606 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ATP6V1AP38606 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ATP6V1AP38606 AL031133.1-201ENST00000406807 723 ntBASIC25.28■■□□□ 1.64
ATP6V1AP38606 FAM8A6P-201ENST00000407496 1135 ntBASIC25.28■■□□□ 1.64
ATP6V1AP38606 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ATP6V1AP38606 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ATP6V1AP38606 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC25.28■■□□□ 1.64
ATP6V1AP38606 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ATP6V1AP38606 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC25.28■■□□□ 1.64
ATP6V1AP38606 HLA-A-209ENST00000638375 975 ntBASIC25.28■■□□□ 1.64
ATP6V1AP38606 AC116562.4-202ENST00000641738 218 ntBASIC25.28■■□□□ 1.64
ATP6V1AP38606 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ATP6V1AP38606 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ATP6V1AP38606 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC25.28■■□□□ 1.64
ATP6V1AP38606 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ATP6V1AP38606 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ATP6V1AP38606 AL117328.2-201ENST00000624617 1940 ntBASIC25.27■■□□□ 1.64
ATP6V1AP38606 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
ATP6V1AP38606 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ATP6V1AP38606 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC25.27■■□□□ 1.64
ATP6V1AP38606 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ATP6V1AP38606 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ATP6V1AP38606 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
ATP6V1AP38606 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
ATP6V1AP38606 RNF152P1-201ENST00000397754 604 ntBASIC25.27■■□□□ 1.64
ATP6V1AP38606 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC25.27■■□□□ 1.64
ATP6V1AP38606 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
ATP6V1AP38606 MFAP1P1-201ENST00000442257 1255 ntBASIC25.27■■□□□ 1.64
ATP6V1AP38606 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
ATP6V1AP38606 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC25.27■■□□□ 1.64
ATP6V1AP38606 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ATP6V1AP38606 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC25.27■■□□□ 1.64
ATP6V1AP38606 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC25.27■■□□□ 1.64
ATP6V1AP38606 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC25.27■■□□□ 1.64
ATP6V1AP38606 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC25.27■■□□□ 1.64
ATP6V1AP38606 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ATP6V1AP38606 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ATP6V1AP38606 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ATP6V1AP38606 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
ATP6V1AP38606 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC25.27■■□□□ 1.64
ATP6V1AP38606 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
ATP6V1AP38606 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V1AP38606 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V1AP38606 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V1AP38606 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V1AP38606 AC004951.3-201ENST00000418645 1148 ntBASIC25.26■■□□□ 1.63
ATP6V1AP38606 SAPCD2P2-201ENST00000431719 1174 ntBASIC25.26■■□□□ 1.63
ATP6V1AP38606 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V1AP38606 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC25.26■■□□□ 1.63
ATP6V1AP38606 CLN6-204ENST00000564752 900 ntTSL 3 BASIC25.26■■□□□ 1.63
ATP6V1AP38606 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
ATP6V1AP38606 METTL23-204ENST00000586752 904 ntTSL 2 BASIC25.26■■□□□ 1.63
ATP6V1AP38606 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V1AP38606 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V1AP38606 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V1AP38606 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V1AP38606 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V1AP38606 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V1AP38606 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC25.26■■□□□ 1.63
ATP6V1AP38606 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V1AP38606 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V1AP38606 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC25.25■■□□□ 1.63
ATP6V1AP38606 BID-212ENST00000614949 1988 ntTSL 5 BASIC25.25■■□□□ 1.63
ATP6V1AP38606 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ATP6V1AP38606 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
ATP6V1AP38606 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ATP6V1AP38606 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ATP6V1AP38606 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
ATP6V1AP38606 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC25.25■■□□□ 1.63
ATP6V1AP38606 YBX1P2-201ENST00000489612 999 ntBASIC25.25■■□□□ 1.63
ATP6V1AP38606 WDR88-203ENST00000592765 651 ntTSL 5 BASIC25.25■■□□□ 1.63
ATP6V1AP38606 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ATP6V1AP38606 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
ATP6V1AP38606 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
ATP6V1AP38606 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
ATP6V1AP38606 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATP6V1AP38606 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC25.24■■□□□ 1.63
ATP6V1AP38606 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC25.24■■□□□ 1.63
ATP6V1AP38606 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC25.24■■□□□ 1.63
ATP6V1AP38606 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATP6V1AP38606 AC096733.2-201ENST00000609937 1394 ntBASIC25.24■■□□□ 1.63
ATP6V1AP38606 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATP6V1AP38606 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC25.24■■□□□ 1.63
ATP6V1AP38606 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
ATP6V1AP38606 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC25.24■■□□□ 1.63
ATP6V1AP38606 FAM207BP-201ENST00000447172 505 ntBASIC25.24■■□□□ 1.63
ATP6V1AP38606 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
ATP6V1AP38606 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC25.24■■□□□ 1.63
ATP6V1AP38606 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC25.24■■□□□ 1.63
ATP6V1AP38606 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC25.24■■□□□ 1.63
ATP6V1AP38606 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC25.24■■□□□ 1.63
ATP6V1AP38606 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC25.24■■□□□ 1.63
ATP6V1AP38606 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
ATP6V1AP38606 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
ATP6V1AP38606 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC25.23■■□□□ 1.63
ATP6V1AP38606 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms