Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HTR1BP28222 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1BP28222 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1BP28222 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1BP28222 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1BP28222 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1BP28222 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HTR1BP28222 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1BP28222 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1BP28222 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.67■□□□□ 0.74
HTR1BP28222 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.67■□□□□ 0.74
HTR1BP28222 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1BP28222 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1BP28222 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.67■□□□□ 0.74
HTR1BP28222 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HTR1BP28222 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1BP28222 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1BP28222 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.67■□□□□ 0.74
HTR1BP28222 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.67■□□□□ 0.74
HTR1BP28222 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1BP28222 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.67■□□□□ 0.74
HTR1BP28222 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1BP28222 KRT16P6-202ENST00000425692 1426 ntBASIC19.67■□□□□ 0.74
HTR1BP28222 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1BP28222 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1BP28222 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HTR1BP28222 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.66■□□□□ 0.74
HTR1BP28222 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HTR1BP28222 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTR1BP28222 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.66■□□□□ 0.74
HTR1BP28222 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTR1BP28222 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HTR1BP28222 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.66■□□□□ 0.74
HTR1BP28222 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HTR1BP28222 KRT16P5-201ENST00000455284 522 ntBASIC19.66■□□□□ 0.74
HTR1BP28222 SNORA78-201ENST00000459373 127 ntBASIC19.66■□□□□ 0.74
HTR1BP28222 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTR1BP28222 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.66■□□□□ 0.74
HTR1BP28222 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HTR1BP28222 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
HTR1BP28222 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.66■□□□□ 0.74
HTR1BP28222 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HTR1BP28222 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTR1BP28222 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.66■□□□□ 0.74
HTR1BP28222 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTR1BP28222 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HTR1BP28222 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.65■□□□□ 0.74
HTR1BP28222 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTR1BP28222 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTR1BP28222 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HTR1BP28222 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.65■□□□□ 0.74
HTR1BP28222 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
HTR1BP28222 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.65■□□□□ 0.74
HTR1BP28222 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTR1BP28222 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTR1BP28222 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HTR1BP28222 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTR1BP28222 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTR1BP28222 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.65■□□□□ 0.74
HTR1BP28222 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HTR1BP28222 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
HTR1BP28222 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.65■□□□□ 0.74
HTR1BP28222 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.65■□□□□ 0.74
HTR1BP28222 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.65■□□□□ 0.74
HTR1BP28222 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTR1BP28222 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.65■□□□□ 0.74
HTR1BP28222 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.65■□□□□ 0.74
HTR1BP28222 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
HTR1BP28222 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTR1BP28222 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.65■□□□□ 0.74
HTR1BP28222 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HTR1BP28222 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
HTR1BP28222 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.64■□□□□ 0.74
HTR1BP28222 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HTR1BP28222 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HTR1BP28222 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HTR1BP28222 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HTR1BP28222 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HTR1BP28222 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HTR1BP28222 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTR1BP28222 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTR1BP28222 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTR1BP28222 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HTR1BP28222 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.64■□□□□ 0.73
HTR1BP28222 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTR1BP28222 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.64■□□□□ 0.73
HTR1BP28222 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.64■□□□□ 0.73
HTR1BP28222 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.64■□□□□ 0.73
HTR1BP28222 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.64■□□□□ 0.73
HTR1BP28222 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
HTR1BP28222 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HTR1BP28222 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HTR1BP28222 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
HTR1BP28222 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTR1BP28222 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
HTR1BP28222 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
HTR1BP28222 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.63■□□□□ 0.73
HTR1BP28222 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HTR1BP28222 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
HTR1BP28222 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms