Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD40P25942 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD40P25942 AP002982.1-201ENST00000492365 877 ntBASIC17.06■□□□□ 0.32
CD40P25942 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.06■□□□□ 0.32
CD40P25942 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD40P25942 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.06■□□□□ 0.32
CD40P25942 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.06■□□□□ 0.32
CD40P25942 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CD40P25942 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.06■□□□□ 0.32
CD40P25942 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.06■□□□□ 0.32
CD40P25942 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.06■□□□□ 0.32
CD40P25942 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD40P25942 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.06■□□□□ 0.32
CD40P25942 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CD40P25942 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD40P25942 AP005212.1-201ENST00000581547 1997 ntBASIC17.06■□□□□ 0.32
CD40P25942 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD40P25942 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD40P25942 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CD40P25942 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD40P25942 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD40P25942 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD40P25942 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD40P25942 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD40P25942 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD40P25942 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.05■□□□□ 0.32
CD40P25942 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CD40P25942 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD40P25942 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD40P25942 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CD40P25942 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD40P25942 CLDN5-201ENST00000403084 2357 ntBASIC17.05■□□□□ 0.32
CD40P25942 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD40P25942 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD40P25942 YBX1P10-201ENST00000444752 975 ntBASIC17.05■□□□□ 0.32
CD40P25942 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.05■□□□□ 0.32
CD40P25942 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.05■□□□□ 0.32
CD40P25942 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD40P25942 AC073195.1-201ENST00000607241 877 ntBASIC17.05■□□□□ 0.32
CD40P25942 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD40P25942 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.05■□□□□ 0.32
CD40P25942 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CD40P25942 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD40P25942 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD40P25942 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CD40P25942 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CD40P25942 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD40P25942 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.05■□□□□ 0.32
CD40P25942 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CD40P25942 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD40P25942 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CD40P25942 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.04■□□□□ 0.32
CD40P25942 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CD40P25942 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.04■□□□□ 0.32
CD40P25942 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CD40P25942 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CD40P25942 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.04■□□□□ 0.32
CD40P25942 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.04■□□□□ 0.32
CD40P25942 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.04■□□□□ 0.32
CD40P25942 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CD40P25942 CD177P1-201ENST00000606252 935 ntBASIC17.04■□□□□ 0.32
CD40P25942 AL353708.3-201ENST00000610272 989 ntBASIC17.04■□□□□ 0.32
CD40P25942 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD40P25942 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD40P25942 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD40P25942 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD40P25942 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD40P25942 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD40P25942 FEM1AP1-201ENST00000431297 1995 ntBASIC17.04■□□□□ 0.32
CD40P25942 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.04■□□□□ 0.32
CD40P25942 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD40P25942 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD40P25942 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD40P25942 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD40P25942 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CD40P25942 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CD40P25942 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.03■□□□□ 0.32
CD40P25942 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD40P25942 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD40P25942 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD40P25942 FAM197Y1-201ENST00000421178 764 ntBASIC17.03■□□□□ 0.32
CD40P25942 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD40P25942 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CD40P25942 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD40P25942 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.03■□□□□ 0.32
CD40P25942 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD40P25942 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.03■□□□□ 0.32
CD40P25942 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.03■□□□□ 0.32
CD40P25942 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD40P25942 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.03■□□□□ 0.32
CD40P25942 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD40P25942 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.03■□□□□ 0.32
CD40P25942 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD40P25942 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CD40P25942 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD40P25942 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.02■□□□□ 0.32
CD40P25942 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CD40P25942 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CD40P25942 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD40P25942 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms