Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACKR3P25106 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACKR3P25106 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACKR3P25106 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACKR3P25106 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ACKR3P25106 AC023632.3-201ENST00000521633 145 ntBASIC17.14■□□□□ 0.33
ACKR3P25106 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
ACKR3P25106 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.14■□□□□ 0.33
ACKR3P25106 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
ACKR3P25106 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ACKR3P25106 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ACKR3P25106 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.14■□□□□ 0.33
ACKR3P25106 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.14■□□□□ 0.33
ACKR3P25106 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ACKR3P25106 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ACKR3P25106 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
ACKR3P25106 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.14■□□□□ 0.33
ACKR3P25106 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ACKR3P25106 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ACKR3P25106 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACKR3P25106 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ACKR3P25106 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACKR3P25106 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ACKR3P25106 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ACKR3P25106 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACKR3P25106 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACKR3P25106 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ACKR3P25106 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACKR3P25106 HLA-G-202ENST00000376815 851 ntBASIC17.13■□□□□ 0.33
ACKR3P25106 HLA-G-203ENST00000376818 1127 ntBASIC17.13■□□□□ 0.33
ACKR3P25106 GPX1P1-201ENST00000388829 606 ntBASIC17.13■□□□□ 0.33
ACKR3P25106 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ACKR3P25106 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ACKR3P25106 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.13■□□□□ 0.33
ACKR3P25106 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC17.13■□□□□ 0.33
ACKR3P25106 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ACKR3P25106 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.13■□□□□ 0.33
ACKR3P25106 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.13■□□□□ 0.33
ACKR3P25106 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ACKR3P25106 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACKR3P25106 AC009237.14-201ENST00000609975 1594 ntBASIC17.13■□□□□ 0.33
ACKR3P25106 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.13■□□□□ 0.33
ACKR3P25106 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.13■□□□□ 0.33
ACKR3P25106 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACKR3P25106 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ACKR3P25106 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACKR3P25106 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.13■□□□□ 0.33
ACKR3P25106 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ACKR3P25106 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACKR3P25106 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACKR3P25106 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ACKR3P25106 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACKR3P25106 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ACKR3P25106 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACKR3P25106 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
ACKR3P25106 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ACKR3P25106 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACKR3P25106 AC006970.2-201ENST00000450065 779 ntBASIC17.12■□□□□ 0.33
ACKR3P25106 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.12■□□□□ 0.33
ACKR3P25106 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.12■□□□□ 0.33
ACKR3P25106 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACKR3P25106 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACKR3P25106 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ACKR3P25106 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACKR3P25106 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACKR3P25106 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.12■□□□□ 0.33
ACKR3P25106 TREX1-205ENST00000625293 1783 ntBASIC17.12■□□□□ 0.33
ACKR3P25106 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ACKR3P25106 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ACKR3P25106 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ACKR3P25106 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
ACKR3P25106 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACKR3P25106 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.11■□□□□ 0.33
ACKR3P25106 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.11■□□□□ 0.33
ACKR3P25106 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACKR3P25106 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACKR3P25106 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACKR3P25106 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACKR3P25106 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.11■□□□□ 0.33
ACKR3P25106 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ACKR3P25106 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.11■□□□□ 0.33
ACKR3P25106 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.11■□□□□ 0.33
ACKR3P25106 AC083906.2-201ENST00000511578 360 ntBASIC17.11■□□□□ 0.33
ACKR3P25106 AL121832.2-201ENST00000610979 668 ntBASIC17.11■□□□□ 0.33
ACKR3P25106 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACKR3P25106 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACKR3P25106 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ACKR3P25106 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.11■□□□□ 0.33
ACKR3P25106 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACKR3P25106 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACKR3P25106 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ACKR3P25106 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACKR3P25106 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ACKR3P25106 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.1■□□□□ 0.33
ACKR3P25106 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACKR3P25106 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
ACKR3P25106 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ACKR3P25106 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ACKR3P25106 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ACKR3P25106 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms