Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3BP20337 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3BP20337 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3BP20337 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.29■□□□□ 0.36
RAB3BP20337 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3BP20337 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3BP20337 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB3BP20337 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RAB3BP20337 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB3BP20337 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.29■□□□□ 0.36
RAB3BP20337 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.29■□□□□ 0.36
RAB3BP20337 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3BP20337 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB3BP20337 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3BP20337 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3BP20337 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3BP20337 AC005082.1-201ENST00000413042 2259 ntBASIC17.29■□□□□ 0.36
RAB3BP20337 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3BP20337 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3BP20337 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
RAB3BP20337 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RAB3BP20337 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3BP20337 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3BP20337 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.29■□□□□ 0.36
RAB3BP20337 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RAB3BP20337 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.29■□□□□ 0.36
RAB3BP20337 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3BP20337 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAB3BP20337 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
RAB3BP20337 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3BP20337 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3BP20337 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3BP20337 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3BP20337 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3BP20337 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3BP20337 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
RAB3BP20337 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAB3BP20337 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3BP20337 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3BP20337 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAB3BP20337 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB3BP20337 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB3BP20337 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3BP20337 PGM5P4-201ENST00000421970 445 ntBASIC17.28■□□□□ 0.36
RAB3BP20337 AC105265.2-201ENST00000467189 838 ntBASIC17.28■□□□□ 0.36
RAB3BP20337 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3BP20337 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.28■□□□□ 0.36
RAB3BP20337 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
RAB3BP20337 DUX4L2-201ENST00000561772 1275 ntBASIC17.28■□□□□ 0.36
RAB3BP20337 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.28■□□□□ 0.36
RAB3BP20337 AC243732.1-201ENST00000612648 864 ntBASIC17.28■□□□□ 0.36
RAB3BP20337 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
RAB3BP20337 DUX4L6-201ENST00000626483 1275 ntBASIC17.28■□□□□ 0.36
RAB3BP20337 DUX4L1-201ENST00000627662 1275 ntBASIC17.28■□□□□ 0.36
RAB3BP20337 DUX4L8-201ENST00000629013 1275 ntBASIC17.28■□□□□ 0.36
RAB3BP20337 DUX4L3-201ENST00000630187 1275 ntBASIC17.28■□□□□ 0.36
RAB3BP20337 DUX4L7-201ENST00000630678 1275 ntBASIC17.28■□□□□ 0.36
RAB3BP20337 DUX4L5-201ENST00000630834 1275 ntBASIC17.28■□□□□ 0.36
RAB3BP20337 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.28■□□□□ 0.36
RAB3BP20337 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RAB3BP20337 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3BP20337 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RAB3BP20337 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB3BP20337 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3BP20337 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.28■□□□□ 0.36
RAB3BP20337 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAB3BP20337 RASA4CP-201ENST00000424092 1398 ntBASIC17.28■□□□□ 0.36
RAB3BP20337 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3BP20337 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3BP20337 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3BP20337 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
RAB3BP20337 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3BP20337 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
RAB3BP20337 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3BP20337 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3BP20337 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3BP20337 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3BP20337 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RAB3BP20337 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.27■□□□□ 0.36
RAB3BP20337 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB3BP20337 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.27■□□□□ 0.36
RAB3BP20337 AP001330.3-201ENST00000520123 633 ntBASIC17.27■□□□□ 0.36
RAB3BP20337 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.27■□□□□ 0.36
RAB3BP20337 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.27■□□□□ 0.36
RAB3BP20337 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAB3BP20337 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3BP20337 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3BP20337 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3BP20337 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3BP20337 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3BP20337 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3BP20337 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.27■□□□□ 0.35
RAB3BP20337 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3BP20337 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAB3BP20337 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RAB3BP20337 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB3BP20337 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAB3BP20337 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB3BP20337 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.26■□□□□ 0.35
RAB3BP20337 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms