Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.34■□□□□ 0.53
TNFRSF1BP20333 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF1BP20333 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF1BP20333 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF1BP20333 AL032819.2-201ENST00000624543 2162 ntBASIC18.34■□□□□ 0.53
TNFRSF1BP20333 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TNFRSF1BP20333 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF1BP20333 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TNFRSF1BP20333 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.33■□□□□ 0.53
TNFRSF1BP20333 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TNFRSF1BP20333 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TNFRSF1BP20333 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TNFRSF1BP20333 KRT8P20-201ENST00000423953 1409 ntBASIC18.33■□□□□ 0.53
TNFRSF1BP20333 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.33■□□□□ 0.53
TNFRSF1BP20333 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TNFRSF1BP20333 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
TNFRSF1BP20333 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TNFRSF1BP20333 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
TNFRSF1BP20333 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TNFRSF1BP20333 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNFRSF1BP20333 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.33■□□□□ 0.52
TNFRSF1BP20333 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.33■□□□□ 0.52
TNFRSF1BP20333 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.33■□□□□ 0.52
TNFRSF1BP20333 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.33■□□□□ 0.52
TNFRSF1BP20333 KRT18P5-201ENST00000436075 1291 ntBASIC18.33■□□□□ 0.52
TNFRSF1BP20333 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNFRSF1BP20333 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.33■□□□□ 0.52
TNFRSF1BP20333 DUX4L16-201ENST00000555130 1264 ntBASIC18.33■□□□□ 0.52
TNFRSF1BP20333 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNFRSF1BP20333 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TNFRSF1BP20333 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNFRSF1BP20333 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.33■□□□□ 0.52
TNFRSF1BP20333 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNFRSF1BP20333 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TNFRSF1BP20333 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNFRSF1BP20333 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.33■□□□□ 0.52
TNFRSF1BP20333 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TNFRSF1BP20333 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TNFRSF1BP20333 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNFRSF1BP20333 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.32■□□□□ 0.52
TNFRSF1BP20333 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNFRSF1BP20333 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNFRSF1BP20333 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
TNFRSF1BP20333 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TNFRSF1BP20333 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNFRSF1BP20333 KRT18P68-201ENST00000392293 1000 ntBASIC18.32■□□□□ 0.52
TNFRSF1BP20333 KRT18P11-201ENST00000435214 1283 ntBASIC18.32■□□□□ 0.52
TNFRSF1BP20333 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
TNFRSF1BP20333 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
TNFRSF1BP20333 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.32■□□□□ 0.52
TNFRSF1BP20333 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TNFRSF1BP20333 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNFRSF1BP20333 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TNFRSF1BP20333 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TNFRSF1BP20333 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TNFRSF1BP20333 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TNFRSF1BP20333 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.32■□□□□ 0.52
TNFRSF1BP20333 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 MIR6821-201ENST00000617625 74 ntBASIC18.31■□□□□ 0.52
TNFRSF1BP20333 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TNFRSF1BP20333 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TNFRSF1BP20333 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms