Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.95■□□□□ 0.94
PTPN1P18031 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN1P18031 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN1P18031 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PTPN1P18031 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN1P18031 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.95■□□□□ 0.94
PTPN1P18031 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN1P18031 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN1P18031 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.95■□□□□ 0.94
PTPN1P18031 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.95■□□□□ 0.94
PTPN1P18031 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.95■□□□□ 0.94
PTPN1P18031 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN1P18031 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN1P18031 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PTPN1P18031 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN1P18031 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.95■□□□□ 0.94
PTPN1P18031 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PTPN1P18031 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.95■□□□□ 0.94
PTPN1P18031 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN1P18031 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN1P18031 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.95■□□□□ 0.94
PTPN1P18031 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PTPN1P18031 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PTPN1P18031 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
PTPN1P18031 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN1P18031 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPN1P18031 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN1P18031 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPN1P18031 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PTPN1P18031 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN1P18031 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN1P18031 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PTPN1P18031 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.94■□□□□ 0.94
PTPN1P18031 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN1P18031 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.94■□□□□ 0.94
PTPN1P18031 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN1P18031 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PTPN1P18031 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
PTPN1P18031 Z99916.2-201ENST00000604037 246 ntBASIC20.94■□□□□ 0.94
PTPN1P18031 AC004264.1-201ENST00000608354 794 ntBASIC20.94■□□□□ 0.94
PTPN1P18031 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PTPN1P18031 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN1P18031 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN1P18031 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPN1P18031 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.94■□□□□ 0.94
PTPN1P18031 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN1P18031 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PTPN1P18031 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN1P18031 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.93■□□□□ 0.94
PTPN1P18031 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PTPN1P18031 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN1P18031 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PTPN1P18031 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
PTPN1P18031 RPS2P4-201ENST00000476944 856 ntBASIC20.93■□□□□ 0.94
PTPN1P18031 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN1P18031 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.93■□□□□ 0.94
PTPN1P18031 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN1P18031 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN1P18031 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN1P18031 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
PTPN1P18031 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN1P18031 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.93■□□□□ 0.94
PTPN1P18031 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.93■□□□□ 0.94
PTPN1P18031 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN1P18031 AP001271.2-201ENST00000624018 1556 ntBASIC20.93■□□□□ 0.94
PTPN1P18031 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PTPN1P18031 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPN1P18031 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.92■□□□□ 0.94
PTPN1P18031 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPN1P18031 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPN1P18031 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
PTPN1P18031 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPN1P18031 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN1P18031 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPN1P18031 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN1P18031 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
PTPN1P18031 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.92■□□□□ 0.94
PTPN1P18031 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.92■□□□□ 0.94
PTPN1P18031 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.92■□□□□ 0.94
PTPN1P18031 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN1P18031 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.92■□□□□ 0.94
PTPN1P18031 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN1P18031 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN1P18031 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN1P18031 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PTPN1P18031 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.92■□□□□ 0.94
PTPN1P18031 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN1P18031 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.92■□□□□ 0.94
PTPN1P18031 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN1P18031 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PTPN1P18031 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.91■□□□□ 0.94
PTPN1P18031 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN1P18031 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN1P18031 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PTPN1P18031 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPN1P18031 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PTPN1P18031 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PTPN1P18031 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
PTPN1P18031 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN1P18031 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms