Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEPDP12955 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEPDP12955 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEPDP12955 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEPDP12955 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEPDP12955 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEPDP12955 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PEPDP12955 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEPDP12955 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PEPDP12955 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PEPDP12955 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.25■□□□□ 0.51
PEPDP12955 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.25■□□□□ 0.51
PEPDP12955 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEPDP12955 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEPDP12955 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PEPDP12955 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.25■□□□□ 0.51
PEPDP12955 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PEPDP12955 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.25■□□□□ 0.51
PEPDP12955 DPP3P2-201ENST00000416030 1696 ntBASIC18.25■□□□□ 0.51
PEPDP12955 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEPDP12955 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PEPDP12955 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PEPDP12955 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PEPDP12955 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.24■□□□□ 0.51
PEPDP12955 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.24■□□□□ 0.51
PEPDP12955 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PEPDP12955 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PEPDP12955 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.24■□□□□ 0.51
PEPDP12955 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.24■□□□□ 0.51
PEPDP12955 FAM201B-201ENST00000458407 597 ntBASIC18.24■□□□□ 0.51
PEPDP12955 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
PEPDP12955 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.24■□□□□ 0.51
PEPDP12955 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PEPDP12955 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PEPDP12955 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PEPDP12955 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.24■□□□□ 0.51
PEPDP12955 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PEPDP12955 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PEPDP12955 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PEPDP12955 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PEPDP12955 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PEPDP12955 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PEPDP12955 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PEPDP12955 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
PEPDP12955 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.23■□□□□ 0.51
PEPDP12955 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PEPDP12955 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PEPDP12955 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PEPDP12955 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.23■□□□□ 0.51
PEPDP12955 AC092368.3-202ENST00000574180 1591 ntBASIC18.23■□□□□ 0.51
PEPDP12955 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PEPDP12955 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.23■□□□□ 0.51
PEPDP12955 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.23■□□□□ 0.51
PEPDP12955 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PEPDP12955 UNC93B5-201ENST00000530315 699 ntBASIC18.23■□□□□ 0.51
PEPDP12955 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PEPDP12955 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PEPDP12955 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PEPDP12955 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.23■□□□□ 0.51
PEPDP12955 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PEPDP12955 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PEPDP12955 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PEPDP12955 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PEPDP12955 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.22■□□□□ 0.51
PEPDP12955 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PEPDP12955 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PEPDP12955 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.22■□□□□ 0.51
PEPDP12955 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PEPDP12955 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PEPDP12955 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PEPDP12955 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PEPDP12955 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PEPDP12955 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PEPDP12955 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PEPDP12955 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.22■□□□□ 0.51
PEPDP12955 TSPY20P-201ENST00000450910 630 ntBASIC18.22■□□□□ 0.51
PEPDP12955 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.22■□□□□ 0.51
PEPDP12955 PNMA6B-201ENST00000538162 1200 ntBASIC18.22■□□□□ 0.51
PEPDP12955 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PEPDP12955 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.22■□□□□ 0.51
PEPDP12955 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PEPDP12955 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PEPDP12955 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.22■□□□□ 0.51
PEPDP12955 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.22■□□□□ 0.51
PEPDP12955 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.22■□□□□ 0.51
PEPDP12955 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PEPDP12955 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PEPDP12955 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PEPDP12955 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.22■□□□□ 0.51
PEPDP12955 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PEPDP12955 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PEPDP12955 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PEPDP12955 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PEPDP12955 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.22■□□□□ 0.51
PEPDP12955 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PEPDP12955 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PEPDP12955 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PEPDP12955 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PEPDP12955 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PEPDP12955 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms