Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.57■□□□□ 0.56
TPRP12270 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPRP12270 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
TPRP12270 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPRP12270 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPRP12270 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.57■□□□□ 0.56
TPRP12270 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TPRP12270 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPRP12270 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPRP12270 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.57■□□□□ 0.56
TPRP12270 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPRP12270 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPRP12270 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.57■□□□□ 0.56
TPRP12270 BX119927.1-201ENST00000636596 1552 ntBASIC18.57■□□□□ 0.56
TPRP12270 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TPRP12270 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.56■□□□□ 0.56
TPRP12270 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPRP12270 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPRP12270 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TPRP12270 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPRP12270 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPRP12270 HLA-G-203ENST00000376818 1127 ntBASIC18.56■□□□□ 0.56
TPRP12270 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPRP12270 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TPRP12270 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.56■□□□□ 0.56
TPRP12270 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.56■□□□□ 0.56
TPRP12270 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TPRP12270 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.56■□□□□ 0.56
TPRP12270 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPRP12270 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TPRP12270 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TPRP12270 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
TPRP12270 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPRP12270 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPRP12270 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPRP12270 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.56■□□□□ 0.56
TPRP12270 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.56■□□□□ 0.56
TPRP12270 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TPRP12270 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TPRP12270 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.56■□□□□ 0.56
TPRP12270 AC008040.2-201ENST00000461049 708 ntBASIC18.56■□□□□ 0.56
TPRP12270 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.56■□□□□ 0.56
TPRP12270 RCC2P6-201ENST00000526625 1557 ntBASIC18.56■□□□□ 0.56
TPRP12270 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TPRP12270 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.55■□□□□ 0.56
TPRP12270 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPRP12270 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPRP12270 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.55■□□□□ 0.56
TPRP12270 AC023632.3-201ENST00000521633 145 ntBASIC18.55■□□□□ 0.56
TPRP12270 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TPRP12270 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPRP12270 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.55■□□□□ 0.56
TPRP12270 AC091304.2-201ENST00000564639 760 ntBASIC18.55■□□□□ 0.56
TPRP12270 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.55■□□□□ 0.56
TPRP12270 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.55■□□□□ 0.56
TPRP12270 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TPRP12270 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.55■□□□□ 0.56
TPRP12270 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPRP12270 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.55■□□□□ 0.56
TPRP12270 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPRP12270 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TPRP12270 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPRP12270 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TPRP12270 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPRP12270 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.55■□□□□ 0.56
TPRP12270 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPRP12270 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPRP12270 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.55■□□□□ 0.56
TPRP12270 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
TPRP12270 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TPRP12270 AL121912.1-201ENST00000603683 238 ntBASIC18.55■□□□□ 0.56
TPRP12270 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPRP12270 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TPRP12270 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPRP12270 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPRP12270 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPRP12270 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TPRP12270 AC016734.2-201ENST00000624325 1377 ntBASIC18.54■□□□□ 0.56
TPRP12270 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TPRP12270 HBZP1-201ENST00000354915 429 ntBASIC18.54■□□□□ 0.56
TPRP12270 SPDYE13P-201ENST00000445314 798 ntBASIC18.54■□□□□ 0.56
TPRP12270 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
TPRP12270 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPRP12270 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.54■□□□□ 0.56
TPRP12270 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPRP12270 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
TPRP12270 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPRP12270 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.54■□□□□ 0.56
TPRP12270 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.54■□□□□ 0.56
TPRP12270 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.54■□□□□ 0.56
TPRP12270 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPRP12270 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.54■□□□□ 0.56
TPRP12270 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.54■□□□□ 0.56
TPRP12270 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.54■□□□□ 0.56
TPRP12270 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TPRP12270 AC068473.5-201ENST00000616428 2072 ntBASIC18.54■□□□□ 0.56
TPRP12270 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TPRP12270 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TPRP12270 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.53■□□□□ 0.56
TPRP12270 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms