Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC26.18■■□□□ 1.78
COL5A2P05997 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC26.18■■□□□ 1.78
COL5A2P05997 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL5A2P05997 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
COL5A2P05997 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL5A2P05997 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC26.18■■□□□ 1.78
COL5A2P05997 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL5A2P05997 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL5A2P05997 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL5A2P05997 PLK5-205ENST00000642079 1969 ntBASIC26.18■■□□□ 1.78
COL5A2P05997 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL5A2P05997 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
COL5A2P05997 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
COL5A2P05997 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
COL5A2P05997 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC26.17■■□□□ 1.78
COL5A2P05997 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC26.17■■□□□ 1.78
COL5A2P05997 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
COL5A2P05997 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL5A2P05997 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC26.17■■□□□ 1.78
COL5A2P05997 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL5A2P05997 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL5A2P05997 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC26.17■■□□□ 1.78
COL5A2P05997 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC26.17■■□□□ 1.78
COL5A2P05997 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC26.17■■□□□ 1.78
COL5A2P05997 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC26.17■■□□□ 1.78
COL5A2P05997 AC011558.1-201ENST00000623459 338 ntBASIC26.17■■□□□ 1.78
COL5A2P05997 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
COL5A2P05997 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL5A2P05997 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL5A2P05997 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL5A2P05997 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL5A2P05997 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL5A2P05997 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC26.17■■□□□ 1.78
COL5A2P05997 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL5A2P05997 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
COL5A2P05997 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
COL5A2P05997 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL5A2P05997 PHGDH-210ENST00000641115 1638 ntBASIC26.17■■□□□ 1.78
COL5A2P05997 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL5A2P05997 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL5A2P05997 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC26.17■■□□□ 1.78
COL5A2P05997 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
COL5A2P05997 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC26.17■■□□□ 1.78
COL5A2P05997 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC26.17■■□□□ 1.78
COL5A2P05997 GXYLT1P6-201ENST00000456472 1187 ntBASIC26.17■■□□□ 1.78
COL5A2P05997 AL359075.1-203ENST00000462729 1002 ntBASIC26.17■■□□□ 1.78
COL5A2P05997 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC26.17■■□□□ 1.78
COL5A2P05997 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
COL5A2P05997 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC26.17■■□□□ 1.78
COL5A2P05997 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC26.17■■□□□ 1.78
COL5A2P05997 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC26.17■■□□□ 1.78
COL5A2P05997 AC008622.2-201ENST00000617006 1229 ntBASIC26.17■■□□□ 1.78
COL5A2P05997 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL5A2P05997 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL5A2P05997 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL5A2P05997 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL5A2P05997 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC26.16■■□□□ 1.78
COL5A2P05997 AC005332.1-201ENST00000577698 1310 ntBASIC26.16■■□□□ 1.78
COL5A2P05997 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL5A2P05997 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL5A2P05997 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL5A2P05997 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
COL5A2P05997 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
COL5A2P05997 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
COL5A2P05997 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC26.16■■□□□ 1.78
COL5A2P05997 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
COL5A2P05997 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC26.16■■□□□ 1.78
COL5A2P05997 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC26.16■■□□□ 1.78
COL5A2P05997 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC26.16■■□□□ 1.78
COL5A2P05997 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC26.16■■□□□ 1.78
COL5A2P05997 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC26.16■■□□□ 1.78
COL5A2P05997 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC26.16■■□□□ 1.78
COL5A2P05997 AC116407.4-201ENST00000623319 1061 ntBASIC26.16■■□□□ 1.78
COL5A2P05997 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
COL5A2P05997 MYB-221ENST00000527615 2381 ntTSL 5 BASIC26.15■■□□□ 1.78
COL5A2P05997 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL5A2P05997 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC26.15■■□□□ 1.78
COL5A2P05997 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL5A2P05997 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC26.15■■□□□ 1.78
COL5A2P05997 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL5A2P05997 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL5A2P05997 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC26.15■■□□□ 1.78
COL5A2P05997 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL5A2P05997 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
COL5A2P05997 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC26.15■■□□□ 1.78
COL5A2P05997 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC26.15■■□□□ 1.78
COL5A2P05997 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC26.15■■□□□ 1.78
COL5A2P05997 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC26.15■■□□□ 1.78
COL5A2P05997 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC26.15■■□□□ 1.78
COL5A2P05997 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC26.15■■□□□ 1.78
COL5A2P05997 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC26.15■■□□□ 1.78
COL5A2P05997 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC26.15■■□□□ 1.78
COL5A2P05997 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
COL5A2P05997 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC26.15■■□□□ 1.78
COL5A2P05997 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
COL5A2P05997 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
COL5A2P05997 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
COL5A2P05997 KRT16P6-202ENST00000425692 1426 ntBASIC26.14■■□□□ 1.78
COL5A2P05997 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
COL5A2P05997 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms