Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB2P05538 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB2P05538 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
HLA-DQB2P05538 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB2P05538 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.07■□□□□ 0.8
HLA-DQB2P05538 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB2P05538 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
HLA-DQB2P05538 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.07■□□□□ 0.8
HLA-DQB2P05538 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB2P05538 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB2P05538 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB2P05538 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.07■□□□□ 0.8
HLA-DQB2P05538 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HLA-DQB2P05538 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 CD99P1-205ENST00000527459 561 ntBASIC20.06■□□□□ 0.8
HLA-DQB2P05538 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 AL158211.5-201ENST00000623583 2518 ntBASIC20.06■□□□□ 0.8
HLA-DQB2P05538 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HLA-DQB2P05538 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 POM121L13P-201ENST00000422362 380 ntBASIC20.05■□□□□ 0.8
HLA-DQB2P05538 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 AC026366.1-201ENST00000488803 879 ntBASIC20.05■□□□□ 0.8
HLA-DQB2P05538 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 MIR4651-201ENST00000582622 73 ntBASIC20.05■□□□□ 0.8
HLA-DQB2P05538 AL121906.2-201ENST00000621597 723 ntBASIC20.05■□□□□ 0.8
HLA-DQB2P05538 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
HLA-DQB2P05538 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HLA-DQB2P05538 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQB2P05538 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HLA-DQB2P05538 TREX1-205ENST00000625293 1783 ntBASIC20.03■□□□□ 0.8
HLA-DQB2P05538 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQB2P05538 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQB2P05538 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
HLA-DQB2P05538 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms