Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.07■□□□□ 0.48
P04436 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04436 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P04436 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04436 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
P04436 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.07■□□□□ 0.48
P04436 CLDN5-201ENST00000403084 2357 ntBASIC18.06■□□□□ 0.48
P04436 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04436 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04436 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
P04436 HTR7P1-201ENST00000538670 1336 ntBASIC18.06■□□□□ 0.48
P04436 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
P04436 TFP1-202ENST00000475455 1573 ntBASIC18.06■□□□□ 0.48
P04436 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
P04436 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04436 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.06■□□□□ 0.48
P04436 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
P04436 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
P04436 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04436 AL596275.1-201ENST00000423464 877 ntBASIC18.06■□□□□ 0.48
P04436 AL353807.1-201ENST00000427475 662 ntBASIC18.06■□□□□ 0.48
P04436 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.06■□□□□ 0.48
P04436 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04436 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.06■□□□□ 0.48
P04436 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.06■□□□□ 0.48
P04436 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
P04436 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.06■□□□□ 0.48
P04436 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.06■□□□□ 0.48
P04436 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
P04436 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04436 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04436 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.06■□□□□ 0.48
P04436 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04436 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.05■□□□□ 0.48
P04436 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.05■□□□□ 0.48
P04436 GABARAPL3-202ENST00000624044 1851 ntBASIC18.05■□□□□ 0.48
P04436 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P04436 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
P04436 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P04436 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
P04436 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
P04436 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.05■□□□□ 0.48
P04436 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.05■□□□□ 0.48
P04436 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.05■□□□□ 0.48
P04436 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.05■□□□□ 0.48
P04436 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.05■□□□□ 0.48
P04436 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
P04436 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
P04436 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
P04436 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
P04436 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P04436 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.05■□□□□ 0.48
P04436 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P04436 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
P04436 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.04■□□□□ 0.48
P04436 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
P04436 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P04436 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P04436 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P04436 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
P04436 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.04■□□□□ 0.48
P04436 SNORA78-201ENST00000459373 127 ntBASIC18.04■□□□□ 0.48
P04436 MIR4497-201ENST00000583208 89 ntBASIC18.04■□□□□ 0.48
P04436 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
P04436 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.04■□□□□ 0.48
P04436 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.04■□□□□ 0.48
P04436 AL049637.2-201ENST00000641778 930 ntBASIC18.04■□□□□ 0.48
P04436 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
P04436 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
P04436 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
P04436 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
P04436 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.04■□□□□ 0.48
P04436 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.03■□□□□ 0.48
P04436 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
P04436 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.03■□□□□ 0.48
P04436 YBX1P10-201ENST00000444752 975 ntBASIC18.03■□□□□ 0.48
P04436 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
P04436 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.03■□□□□ 0.48
P04436 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.03■□□□□ 0.48
P04436 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.03■□□□□ 0.48
P04436 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
P04436 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
P04436 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms