Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRUB2O95900 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.73■□□□□ 0.91
TRUB2O95900 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRUB2O95900 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TRUB2O95900 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.73■□□□□ 0.91
TRUB2O95900 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.73■□□□□ 0.91
TRUB2O95900 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRUB2O95900 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.73■□□□□ 0.91
TRUB2O95900 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRUB2O95900 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TRUB2O95900 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.73■□□□□ 0.91
TRUB2O95900 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
TRUB2O95900 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRUB2O95900 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRUB2O95900 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRUB2O95900 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRUB2O95900 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRUB2O95900 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRUB2O95900 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.72■□□□□ 0.91
TRUB2O95900 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRUB2O95900 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRUB2O95900 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRUB2O95900 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TRUB2O95900 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TRUB2O95900 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRUB2O95900 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRUB2O95900 AC009237.14-201ENST00000609975 1594 ntBASIC20.72■□□□□ 0.91
TRUB2O95900 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRUB2O95900 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.71■□□□□ 0.91
TRUB2O95900 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.71■□□□□ 0.91
TRUB2O95900 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TRUB2O95900 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRUB2O95900 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TRUB2O95900 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRUB2O95900 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRUB2O95900 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
TRUB2O95900 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.71■□□□□ 0.91
TRUB2O95900 AC128676.1-201ENST00000454392 318 ntBASIC20.71■□□□□ 0.91
TRUB2O95900 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRUB2O95900 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.71■□□□□ 0.91
TRUB2O95900 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRUB2O95900 AC233263.1-201ENST00000578059 224 ntBASIC20.71■□□□□ 0.91
TRUB2O95900 AC069544.1-201ENST00000609399 999 ntBASIC20.71■□□□□ 0.91
TRUB2O95900 ITM2C-210ENST00000620962 501 ntBASIC20.71■□□□□ 0.91
TRUB2O95900 AC073648.6-201ENST00000641589 218 ntBASIC20.71■□□□□ 0.91
TRUB2O95900 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRUB2O95900 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.71■□□□□ 0.91
TRUB2O95900 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.71■□□□□ 0.91
TRUB2O95900 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRUB2O95900 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRUB2O95900 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.71■□□□□ 0.91
TRUB2O95900 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRUB2O95900 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TRUB2O95900 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRUB2O95900 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
TRUB2O95900 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.7■□□□□ 0.9
TRUB2O95900 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRUB2O95900 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.7■□□□□ 0.9
TRUB2O95900 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
TRUB2O95900 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.7■□□□□ 0.9
TRUB2O95900 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.7■□□□□ 0.9
TRUB2O95900 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TRUB2O95900 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRUB2O95900 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRUB2O95900 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.7■□□□□ 0.9
TRUB2O95900 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRUB2O95900 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRUB2O95900 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.7■□□□□ 0.9
TRUB2O95900 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRUB2O95900 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
TRUB2O95900 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRUB2O95900 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TRUB2O95900 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRUB2O95900 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.7■□□□□ 0.9
TRUB2O95900 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TRUB2O95900 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRUB2O95900 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.7■□□□□ 0.9
TRUB2O95900 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRUB2O95900 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRUB2O95900 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.69■□□□□ 0.9
TRUB2O95900 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.69■□□□□ 0.9
TRUB2O95900 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRUB2O95900 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRUB2O95900 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRUB2O95900 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRUB2O95900 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
TRUB2O95900 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRUB2O95900 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRUB2O95900 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRUB2O95900 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.69■□□□□ 0.9
TRUB2O95900 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
TRUB2O95900 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRUB2O95900 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TRUB2O95900 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRUB2O95900 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRUB2O95900 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.68■□□□□ 0.9
TRUB2O95900 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRUB2O95900 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRUB2O95900 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRUB2O95900 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms