Protein–RNA interactions for Protein: O95714

HERC2, E3 ubiquitin-protein ligase HERC2, humanhuman

Predictions only

Length 4,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2O95714 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HERC2O95714 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HERC2O95714 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC12.35□□□□□ -0.43
HERC2O95714 AL139125.2-201ENST00000623134 1869 ntBASIC12.35□□□□□ -0.43
HERC2O95714 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HERC2O95714 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
HERC2O95714 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.35□□□□□ -0.43
HERC2O95714 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HERC2O95714 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.35□□□□□ -0.43
HERC2O95714 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC12.35□□□□□ -0.43
HERC2O95714 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
HERC2O95714 KRT18P28-201ENST00000453838 1332 ntBASIC12.35□□□□□ -0.43
HERC2O95714 ECEL1P1-201ENST00000373592 1742 ntBASIC12.34□□□□□ -0.43
HERC2O95714 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HERC2O95714 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
HERC2O95714 AP006288.1-201ENST00000446065 395 ntBASIC12.34□□□□□ -0.43
HERC2O95714 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
HERC2O95714 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC12.34□□□□□ -0.43
HERC2O95714 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HERC2O95714 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HERC2O95714 AC112482.1-201ENST00000492080 688 ntBASIC12.34□□□□□ -0.43
HERC2O95714 AL356652.1-201ENST00000615962 565 ntBASIC12.34□□□□□ -0.43
HERC2O95714 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HERC2O95714 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HERC2O95714 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.34□□□□□ -0.43
HERC2O95714 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HERC2O95714 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HERC2O95714 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.34□□□□□ -0.43
HERC2O95714 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.34□□□□□ -0.43
HERC2O95714 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
HERC2O95714 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HERC2O95714 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HERC2O95714 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC12.34□□□□□ -0.43
HERC2O95714 BET1L-206ENST00000486280 665 ntTSL 3 BASIC12.34□□□□□ -0.43
HERC2O95714 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.34□□□□□ -0.43
HERC2O95714 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HERC2O95714 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.34□□□□□ -0.43
HERC2O95714 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.43
HERC2O95714 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
HERC2O95714 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HERC2O95714 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.33□□□□□ -0.44
HERC2O95714 AF238378.1-201ENST00000526806 358 ntBASIC12.33□□□□□ -0.44
HERC2O95714 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC12.33□□□□□ -0.44
HERC2O95714 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC12.33□□□□□ -0.44
HERC2O95714 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HERC2O95714 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HERC2O95714 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HERC2O95714 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HERC2O95714 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
HERC2O95714 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.33□□□□□ -0.44
HERC2O95714 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.33□□□□□ -0.44
HERC2O95714 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HERC2O95714 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HERC2O95714 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HERC2O95714 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.33□□□□□ -0.44
HERC2O95714 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HERC2O95714 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC12.33□□□□□ -0.44
HERC2O95714 CHCHD2P8-201ENST00000429873 447 ntBASIC12.33□□□□□ -0.44
HERC2O95714 METTL21AP1-201ENST00000438852 635 ntBASIC12.33□□□□□ -0.44
HERC2O95714 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.33□□□□□ -0.44
HERC2O95714 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
HERC2O95714 AL606495.2-201ENST00000605867 535 ntBASIC12.33□□□□□ -0.44
HERC2O95714 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HERC2O95714 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HERC2O95714 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HERC2O95714 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HERC2O95714 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HERC2O95714 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC12.32□□□□□ -0.44
HERC2O95714 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HERC2O95714 CA15P1-201ENST00000481698 905 ntBASIC12.32□□□□□ -0.44
HERC2O95714 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
HERC2O95714 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HERC2O95714 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HERC2O95714 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC12.32□□□□□ -0.44
HERC2O95714 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.32□□□□□ -0.44
HERC2O95714 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC12.32□□□□□ -0.44
HERC2O95714 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC12.32□□□□□ -0.44
HERC2O95714 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC12.32□□□□□ -0.44
HERC2O95714 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HERC2O95714 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.32□□□□□ -0.44
HERC2O95714 PAWRP1-201ENST00000451083 565 ntBASIC12.32□□□□□ -0.44
HERC2O95714 RPL13AP23-201ENST00000480739 586 ntBASIC12.32□□□□□ -0.44
HERC2O95714 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
HERC2O95714 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.32□□□□□ -0.44
HERC2O95714 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.32□□□□□ -0.44
HERC2O95714 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HERC2O95714 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HERC2O95714 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HERC2O95714 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.32□□□□□ -0.44
HERC2O95714 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.32□□□□□ -0.44
HERC2O95714 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HERC2O95714 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
HERC2O95714 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HERC2O95714 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.31□□□□□ -0.44
HERC2O95714 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
HERC2O95714 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.31□□□□□ -0.44
HERC2O95714 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
HERC2O95714 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
HERC2O95714 LINC00167-201ENST00000530583 1419 ntBASIC12.31□□□□□ -0.44
HERC2O95714 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms