Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.22■□□□□ 0.99
CSPG5O95196 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSPG5O95196 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSPG5O95196 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
CSPG5O95196 HLA-G-202ENST00000376815 851 ntBASIC21.22■□□□□ 0.99
CSPG5O95196 HLA-G-203ENST00000376818 1127 ntBASIC21.22■□□□□ 0.99
CSPG5O95196 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.22■□□□□ 0.99
CSPG5O95196 ECEL1P2-202ENST00000465689 757 ntBASIC21.22■□□□□ 0.99
CSPG5O95196 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CSPG5O95196 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.22■□□□□ 0.99
CSPG5O95196 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CSPG5O95196 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSPG5O95196 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSPG5O95196 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CSPG5O95196 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.22■□□□□ 0.99
CSPG5O95196 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CSPG5O95196 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSPG5O95196 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSPG5O95196 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSPG5O95196 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSPG5O95196 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.21■□□□□ 0.99
CSPG5O95196 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSPG5O95196 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.21■□□□□ 0.99
CSPG5O95196 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSPG5O95196 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.21■□□□□ 0.99
CSPG5O95196 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSPG5O95196 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
CSPG5O95196 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.21■□□□□ 0.99
CSPG5O95196 KSR1P1-201ENST00000446298 240 ntBASIC21.21■□□□□ 0.99
CSPG5O95196 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.21■□□□□ 0.99
CSPG5O95196 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.21■□□□□ 0.99
CSPG5O95196 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.21■□□□□ 0.99
CSPG5O95196 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.21■□□□□ 0.99
CSPG5O95196 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSPG5O95196 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CSPG5O95196 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CSPG5O95196 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSPG5O95196 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSPG5O95196 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSPG5O95196 AC073508.3-201ENST00000619697 1419 ntBASIC21.21■□□□□ 0.99
CSPG5O95196 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.2■□□□□ 0.99
CSPG5O95196 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.2■□□□□ 0.98
CSPG5O95196 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.2■□□□□ 0.98
CSPG5O95196 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CSPG5O95196 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSPG5O95196 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSPG5O95196 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CSPG5O95196 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.2■□□□□ 0.98
CSPG5O95196 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CSPG5O95196 AC006011.2-201ENST00000621313 1158 ntBASIC21.2■□□□□ 0.98
CSPG5O95196 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.2■□□□□ 0.98
CSPG5O95196 SLC25A24-204ENST00000569674 2357 ntBASIC21.2■□□□□ 0.98
CSPG5O95196 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.2■□□□□ 0.98
CSPG5O95196 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.2■□□□□ 0.98
CSPG5O95196 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.19■□□□□ 0.98
CSPG5O95196 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSPG5O95196 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.19■□□□□ 0.98
CSPG5O95196 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CSPG5O95196 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSPG5O95196 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CSPG5O95196 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.19■□□□□ 0.98
CSPG5O95196 AC121338.2-201ENST00000622535 1744 ntBASIC21.19■□□□□ 0.98
CSPG5O95196 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.19■□□□□ 0.98
CSPG5O95196 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CSPG5O95196 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSPG5O95196 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CSPG5O95196 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.19■□□□□ 0.98
CSPG5O95196 AC116562.2-201ENST00000507042 360 ntBASIC21.19■□□□□ 0.98
CSPG5O95196 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.19■□□□□ 0.98
CSPG5O95196 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CSPG5O95196 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSPG5O95196 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
CSPG5O95196 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSPG5O95196 AL121603.2-201ENST00000557373 2117 ntBASIC21.19■□□□□ 0.98
CSPG5O95196 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSPG5O95196 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CSPG5O95196 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CSPG5O95196 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSPG5O95196 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.18■□□□□ 0.98
CSPG5O95196 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.18■□□□□ 0.98
CSPG5O95196 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.18■□□□□ 0.98
CSPG5O95196 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
CSPG5O95196 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.18■□□□□ 0.98
CSPG5O95196 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CSPG5O95196 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSPG5O95196 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.18■□□□□ 0.98
CSPG5O95196 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSPG5O95196 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
CSPG5O95196 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CSPG5O95196 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CSPG5O95196 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSPG5O95196 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSPG5O95196 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.17■□□□□ 0.98
CSPG5O95196 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSPG5O95196 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CSPG5O95196 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
CSPG5O95196 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
CSPG5O95196 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.17■□□□□ 0.98
CSPG5O95196 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.17■□□□□ 0.98
CSPG5O95196 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms