Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
LTN1O94822 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
LTN1O94822 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
LTN1O94822 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
LTN1O94822 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC26.35■■□□□ 1.81
LTN1O94822 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC26.35■■□□□ 1.81
LTN1O94822 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC26.35■■□□□ 1.81
LTN1O94822 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
LTN1O94822 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
LTN1O94822 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
LTN1O94822 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
LTN1O94822 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
LTN1O94822 ARMC10P1-201ENST00000313754 855 ntBASIC26.35■■□□□ 1.81
LTN1O94822 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
LTN1O94822 LIN28AP1-201ENST00000429574 405 ntBASIC26.35■■□□□ 1.81
LTN1O94822 Z85996.1-201ENST00000494644 937 ntBASIC26.35■■□□□ 1.81
LTN1O94822 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
LTN1O94822 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
LTN1O94822 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
LTN1O94822 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
LTN1O94822 MFAP1P1-201ENST00000442257 1255 ntBASIC26.34■■□□□ 1.81
LTN1O94822 TPM1-226ENST00000560959 925 ntTSL 2 BASIC26.34■■□□□ 1.81
LTN1O94822 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC26.34■■□□□ 1.81
LTN1O94822 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC26.34■■□□□ 1.81
LTN1O94822 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC26.34■■□□□ 1.81
LTN1O94822 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC26.34■■□□□ 1.81
LTN1O94822 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC26.34■■□□□ 1.81
LTN1O94822 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
LTN1O94822 MOK-225ENST00000522867 1883 ntTSL 5 BASIC26.34■■□□□ 1.81
LTN1O94822 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC26.33■■□□□ 1.81
LTN1O94822 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
LTN1O94822 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
LTN1O94822 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
LTN1O94822 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC26.33■■□□□ 1.81
LTN1O94822 AC011298.2-201ENST00000617989 482 ntBASIC26.33■■□□□ 1.81
LTN1O94822 LGALS8-AS1-201ENST00000487567 1457 ntBASIC26.33■■□□□ 1.81
LTN1O94822 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
LTN1O94822 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
LTN1O94822 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
LTN1O94822 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC26.33■■□□□ 1.81
LTN1O94822 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
LTN1O94822 FAM207BP-201ENST00000447172 505 ntBASIC26.33■■□□□ 1.8
LTN1O94822 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
LTN1O94822 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
LTN1O94822 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
LTN1O94822 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
LTN1O94822 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC26.32■■□□□ 1.8
LTN1O94822 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC26.32■■□□□ 1.8
LTN1O94822 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC26.32■■□□□ 1.8
LTN1O94822 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
LTN1O94822 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC26.32■■□□□ 1.8
LTN1O94822 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC26.32■■□□□ 1.8
LTN1O94822 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC26.32■■□□□ 1.8
LTN1O94822 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
LTN1O94822 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
LTN1O94822 AK4P3-201ENST00000418260 669 ntBASIC26.32■■□□□ 1.8
LTN1O94822 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC26.32■■□□□ 1.8
LTN1O94822 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC26.32■■□□□ 1.8
LTN1O94822 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
LTN1O94822 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC26.32■■□□□ 1.8
LTN1O94822 FAM87A-204ENST00000613235 858 ntBASIC26.32■■□□□ 1.8
LTN1O94822 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
LTN1O94822 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
LTN1O94822 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC26.32■■□□□ 1.8
LTN1O94822 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC26.31■■□□□ 1.8
LTN1O94822 AC079834.2-201ENST00000609776 1949 ntBASIC26.31■■□□□ 1.8
LTN1O94822 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
LTN1O94822 SMG8-203ENST00000578922 2178 ntBASIC26.31■■□□□ 1.8
LTN1O94822 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
LTN1O94822 KRT8P8-201ENST00000434750 1448 ntBASIC26.31■■□□□ 1.8
LTN1O94822 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
LTN1O94822 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
LTN1O94822 HMGA1P5-201ENST00000412453 271 ntBASIC26.31■■□□□ 1.8
LTN1O94822 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
LTN1O94822 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC26.31■■□□□ 1.8
LTN1O94822 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC26.31■■□□□ 1.8
LTN1O94822 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC26.31■■□□□ 1.8
LTN1O94822 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
LTN1O94822 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC26.31■■□□□ 1.8
LTN1O94822 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC26.31■■□□□ 1.8
LTN1O94822 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
LTN1O94822 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
LTN1O94822 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC26.3■■□□□ 1.8
LTN1O94822 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LTN1O94822 AC004951.3-201ENST00000418645 1148 ntBASIC26.3■■□□□ 1.8
LTN1O94822 SLC25A1P4-201ENST00000567977 778 ntBASIC26.3■■□□□ 1.8
LTN1O94822 AL590326.2-201ENST00000625139 305 ntBASIC26.3■■□□□ 1.8
LTN1O94822 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LTN1O94822 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC26.3■■□□□ 1.8
LTN1O94822 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC26.3■■□□□ 1.8
LTN1O94822 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC26.3■■□□□ 1.8
LTN1O94822 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
LTN1O94822 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
LTN1O94822 LINC00565-201ENST00000562710 2331 ntBASIC26.3■■□□□ 1.8
LTN1O94822 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
LTN1O94822 AC117947.1-201ENST00000427448 529 ntBASIC26.3■■□□□ 1.8
LTN1O94822 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC26.3■■□□□ 1.8
LTN1O94822 EGLN1P1-201ENST00000531623 762 ntBASIC26.3■■□□□ 1.8
LTN1O94822 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC26.3■■□□□ 1.8
LTN1O94822 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms