Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CLPXO76031 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLPXO76031 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
CLPXO76031 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CLPXO76031 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLPXO76031 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CLPXO76031 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CLPXO76031 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CLPXO76031 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLPXO76031 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLPXO76031 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLPXO76031 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLPXO76031 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLPXO76031 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CLPXO76031 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CLPXO76031 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLPXO76031 AC099791.1-201ENST00000416440 715 ntBASIC17.89■□□□□ 0.45
CLPXO76031 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.89■□□□□ 0.45
CLPXO76031 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLPXO76031 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLPXO76031 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLPXO76031 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLPXO76031 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.89■□□□□ 0.45
CLPXO76031 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLPXO76031 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLPXO76031 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLPXO76031 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLPXO76031 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLPXO76031 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.89■□□□□ 0.45
CLPXO76031 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLPXO76031 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.89■□□□□ 0.45
CLPXO76031 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
CLPXO76031 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
CLPXO76031 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLPXO76031 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPXO76031 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPXO76031 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CLPXO76031 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPXO76031 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPXO76031 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLPXO76031 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.88■□□□□ 0.45
CLPXO76031 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPXO76031 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLPXO76031 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPXO76031 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPXO76031 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPXO76031 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLPXO76031 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLPXO76031 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.88■□□□□ 0.45
CLPXO76031 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CLPXO76031 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.88■□□□□ 0.45
CLPXO76031 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPXO76031 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CLPXO76031 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPXO76031 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLPXO76031 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPXO76031 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPXO76031 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLPXO76031 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLPXO76031 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLPXO76031 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.87■□□□□ 0.45
CLPXO76031 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.87■□□□□ 0.45
CLPXO76031 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLPXO76031 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CLPXO76031 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CLPXO76031 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLPXO76031 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CLPXO76031 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CLPXO76031 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLPXO76031 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLPXO76031 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLPXO76031 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLPXO76031 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLPXO76031 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.87■□□□□ 0.45
CLPXO76031 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.87■□□□□ 0.45
CLPXO76031 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CLPXO76031 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLPXO76031 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.87■□□□□ 0.45
CLPXO76031 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLPXO76031 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CLPXO76031 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CLPXO76031 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLPXO76031 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLPXO76031 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CLPXO76031 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLPXO76031 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLPXO76031 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CLPXO76031 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLPXO76031 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.86■□□□□ 0.45
CLPXO76031 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLPXO76031 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CLPXO76031 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.86■□□□□ 0.45
CLPXO76031 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CLPXO76031 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLPXO76031 IRS3P-201ENST00000223076 1006 ntBASIC17.86■□□□□ 0.45
CLPXO76031 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.86■□□□□ 0.45
CLPXO76031 IGHV3-19-201ENST00000521488 291 ntBASIC17.86■□□□□ 0.45
CLPXO76031 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.86■□□□□ 0.45
CLPXO76031 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CLPXO76031 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms