Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT3O75175 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT3O75175 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT3O75175 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT3O75175 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.11■□□□□ 0.65
CNOT3O75175 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.11■□□□□ 0.65
CNOT3O75175 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CNOT3O75175 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CNOT3O75175 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT3O75175 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT3O75175 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT3O75175 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT3O75175 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.1■□□□□ 0.65
CNOT3O75175 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CNOT3O75175 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.1■□□□□ 0.65
CNOT3O75175 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT3O75175 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT3O75175 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT3O75175 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CNOT3O75175 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.1■□□□□ 0.65
CNOT3O75175 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT3O75175 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CNOT3O75175 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.09■□□□□ 0.65
CNOT3O75175 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CNOT3O75175 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT3O75175 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT3O75175 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT3O75175 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT3O75175 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT3O75175 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.09■□□□□ 0.65
CNOT3O75175 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.09■□□□□ 0.65
CNOT3O75175 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.09■□□□□ 0.65
CNOT3O75175 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
CNOT3O75175 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.09■□□□□ 0.65
CNOT3O75175 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT3O75175 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.09■□□□□ 0.65
CNOT3O75175 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT3O75175 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT3O75175 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.09■□□□□ 0.65
CNOT3O75175 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT3O75175 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
CNOT3O75175 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
CNOT3O75175 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CNOT3O75175 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.08■□□□□ 0.65
CNOT3O75175 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT3O75175 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
CNOT3O75175 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.08■□□□□ 0.65
CNOT3O75175 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.08■□□□□ 0.65
CNOT3O75175 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT3O75175 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CNOT3O75175 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT3O75175 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.08■□□□□ 0.64
CNOT3O75175 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT3O75175 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.08■□□□□ 0.64
CNOT3O75175 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.08■□□□□ 0.64
CNOT3O75175 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
CNOT3O75175 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT3O75175 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT3O75175 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT3O75175 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CNOT3O75175 AL359736.2-201ENST00000621992 437 ntBASIC19.08■□□□□ 0.64
CNOT3O75175 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT3O75175 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT3O75175 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CNOT3O75175 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT3O75175 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
CNOT3O75175 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT3O75175 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT3O75175 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT3O75175 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.08■□□□□ 0.64
CNOT3O75175 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CNOT3O75175 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT3O75175 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT3O75175 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CNOT3O75175 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT3O75175 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT3O75175 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT3O75175 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.07■□□□□ 0.64
CNOT3O75175 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.07■□□□□ 0.64
CNOT3O75175 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.07■□□□□ 0.64
CNOT3O75175 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.07■□□□□ 0.64
CNOT3O75175 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.07■□□□□ 0.64
CNOT3O75175 AC069544.1-201ENST00000609399 999 ntBASIC19.07■□□□□ 0.64
CNOT3O75175 MIR2861-201ENST00000636310 90 ntBASIC19.07■□□□□ 0.64
CNOT3O75175 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT3O75175 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT3O75175 AC121338.2-201ENST00000622535 1744 ntBASIC19.07■□□□□ 0.64
CNOT3O75175 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CNOT3O75175 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT3O75175 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.07■□□□□ 0.64
CNOT3O75175 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.07■□□□□ 0.64
CNOT3O75175 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.07■□□□□ 0.64
CNOT3O75175 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT3O75175 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT3O75175 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.07■□□□□ 0.64
CNOT3O75175 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CNOT3O75175 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT3O75175 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CNOT3O75175 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.06■□□□□ 0.64
CNOT3O75175 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms