Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TSPAN3O60637 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TSPAN3O60637 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.38■□□□□ 0.85
TSPAN3O60637 PHGDH-210ENST00000641115 1638 ntBASIC20.38■□□□□ 0.85
TSPAN3O60637 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TSPAN3O60637 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TSPAN3O60637 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TSPAN3O60637 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TSPAN3O60637 GABARAPL3-202ENST00000624044 1851 ntBASIC20.37■□□□□ 0.85
TSPAN3O60637 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TSPAN3O60637 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TSPAN3O60637 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TSPAN3O60637 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.37■□□□□ 0.85
TSPAN3O60637 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TSPAN3O60637 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TSPAN3O60637 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
TSPAN3O60637 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TSPAN3O60637 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TSPAN3O60637 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.37■□□□□ 0.85
TSPAN3O60637 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.37■□□□□ 0.85
TSPAN3O60637 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.37■□□□□ 0.85
TSPAN3O60637 AC233702.5-201ENST00000584107 538 ntBASIC20.37■□□□□ 0.85
TSPAN3O60637 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.37■□□□□ 0.85
TSPAN3O60637 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TSPAN3O60637 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
TSPAN3O60637 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TSPAN3O60637 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TSPAN3O60637 TFP1-202ENST00000475455 1573 ntBASIC20.37■□□□□ 0.85
TSPAN3O60637 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TSPAN3O60637 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TSPAN3O60637 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TSPAN3O60637 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TSPAN3O60637 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TSPAN3O60637 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TSPAN3O60637 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TSPAN3O60637 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TSPAN3O60637 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TSPAN3O60637 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TSPAN3O60637 AC012618.2-201ENST00000428058 849 ntBASIC20.36■□□□□ 0.85
TSPAN3O60637 TSPY7P-201ENST00000431358 1114 ntBASIC20.36■□□□□ 0.85
TSPAN3O60637 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.36■□□□□ 0.85
TSPAN3O60637 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TSPAN3O60637 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TSPAN3O60637 RARRES2P10-201ENST00000564312 460 ntBASIC20.36■□□□□ 0.85
TSPAN3O60637 MIR4497-201ENST00000583208 89 ntBASIC20.36■□□□□ 0.85
TSPAN3O60637 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TSPAN3O60637 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
TSPAN3O60637 AC004264.1-201ENST00000608354 794 ntBASIC20.36■□□□□ 0.85
TSPAN3O60637 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.36■□□□□ 0.85
TSPAN3O60637 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.36■□□□□ 0.85
TSPAN3O60637 AP006587.1-201ENST00000534129 1502 ntBASIC20.36■□□□□ 0.85
TSPAN3O60637 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TSPAN3O60637 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TSPAN3O60637 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TSPAN3O60637 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.35■□□□□ 0.85
TSPAN3O60637 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN3O60637 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.35■□□□□ 0.85
TSPAN3O60637 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TSPAN3O60637 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TSPAN3O60637 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.35■□□□□ 0.85
TSPAN3O60637 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.35■□□□□ 0.85
TSPAN3O60637 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN3O60637 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN3O60637 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TSPAN3O60637 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN3O60637 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TSPAN3O60637 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.35■□□□□ 0.85
TSPAN3O60637 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN3O60637 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN3O60637 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN3O60637 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN3O60637 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TSPAN3O60637 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
TSPAN3O60637 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN3O60637 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.35■□□□□ 0.85
TSPAN3O60637 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN3O60637 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.35■□□□□ 0.85
TSPAN3O60637 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.35■□□□□ 0.85
TSPAN3O60637 AL049637.2-201ENST00000641778 930 ntBASIC20.35■□□□□ 0.85
TSPAN3O60637 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.35■□□□□ 0.85
TSPAN3O60637 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN3O60637 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
TSPAN3O60637 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.35■□□□□ 0.85
TSPAN3O60637 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TSPAN3O60637 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
TSPAN3O60637 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.35■□□□□ 0.85
TSPAN3O60637 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN3O60637 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
TSPAN3O60637 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.34■□□□□ 0.85
TSPAN3O60637 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.34■□□□□ 0.85
TSPAN3O60637 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN3O60637 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.34■□□□□ 0.85
TSPAN3O60637 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN3O60637 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
TSPAN3O60637 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN3O60637 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
TSPAN3O60637 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN3O60637 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN3O60637 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TSPAN3O60637 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms