Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH7O60245 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH7O60245 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH7O60245 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH7O60245 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH7O60245 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH7O60245 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH7O60245 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH7O60245 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.87■□□□□ 0.61
PCDH7O60245 AC092118.2-201ENST00000613495 667 ntBASIC18.87■□□□□ 0.61
PCDH7O60245 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH7O60245 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH7O60245 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH7O60245 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.87■□□□□ 0.61
PCDH7O60245 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH7O60245 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH7O60245 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH7O60245 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PCDH7O60245 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PCDH7O60245 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH7O60245 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH7O60245 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH7O60245 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH7O60245 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDH7O60245 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDH7O60245 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDH7O60245 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
PCDH7O60245 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PCDH7O60245 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDH7O60245 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH7O60245 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
PCDH7O60245 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH7O60245 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH7O60245 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PCDH7O60245 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDH7O60245 NCF1B-203ENST00000435988 1254 ntBASIC18.86■□□□□ 0.61
PCDH7O60245 GUSBP6-202ENST00000438529 1198 ntBASIC18.86■□□□□ 0.61
PCDH7O60245 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PCDH7O60245 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.86■□□□□ 0.61
PCDH7O60245 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH7O60245 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PCDH7O60245 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.86■□□□□ 0.61
PCDH7O60245 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH7O60245 AC116562.4-201ENST00000641316 2276 ntBASIC18.86■□□□□ 0.61
PCDH7O60245 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH7O60245 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH7O60245 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.86■□□□□ 0.61
PCDH7O60245 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PCDH7O60245 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
PCDH7O60245 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH7O60245 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH7O60245 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH7O60245 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH7O60245 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDH7O60245 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDH7O60245 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH7O60245 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PCDH7O60245 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH7O60245 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.85■□□□□ 0.61
PCDH7O60245 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH7O60245 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PCDH7O60245 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDH7O60245 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH7O60245 TSPY6P-201ENST00000448518 926 ntBASIC18.85■□□□□ 0.61
PCDH7O60245 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDH7O60245 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH7O60245 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH7O60245 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.85■□□□□ 0.61
PCDH7O60245 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH7O60245 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.85■□□□□ 0.61
PCDH7O60245 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH7O60245 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH7O60245 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH7O60245 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH7O60245 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH7O60245 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PCDH7O60245 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
PCDH7O60245 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PCDH7O60245 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH7O60245 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH7O60245 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
PCDH7O60245 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH7O60245 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH7O60245 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH7O60245 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH7O60245 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDH7O60245 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDH7O60245 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDH7O60245 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.84■□□□□ 0.61
PCDH7O60245 AC092666.2-201ENST00000613287 246 ntBASIC18.84■□□□□ 0.61
PCDH7O60245 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PCDH7O60245 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH7O60245 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH7O60245 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PCDH7O60245 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.84■□□□□ 0.61
PCDH7O60245 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH7O60245 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH7O60245 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PCDH7O60245 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.83■□□□□ 0.61
PCDH7O60245 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms