Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RIPK2O43353 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK2O43353 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.07■□□□□ 0.8
RIPK2O43353 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RIPK2O43353 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.07■□□□□ 0.8
RIPK2O43353 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RIPK2O43353 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.06■□□□□ 0.8
RIPK2O43353 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK2O43353 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RIPK2O43353 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK2O43353 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK2O43353 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.06■□□□□ 0.8
RIPK2O43353 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RIPK2O43353 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
RIPK2O43353 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.06■□□□□ 0.8
RIPK2O43353 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK2O43353 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
RIPK2O43353 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RIPK2O43353 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK2O43353 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.05■□□□□ 0.8
RIPK2O43353 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.05■□□□□ 0.8
RIPK2O43353 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
RIPK2O43353 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RIPK2O43353 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK2O43353 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.05■□□□□ 0.8
RIPK2O43353 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK2O43353 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK2O43353 KRT8P20-201ENST00000423953 1409 ntBASIC20.05■□□□□ 0.8
RIPK2O43353 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.05■□□□□ 0.8
RIPK2O43353 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RIPK2O43353 AC123595.1-201ENST00000440769 1046 ntBASIC20.05■□□□□ 0.8
RIPK2O43353 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
RIPK2O43353 AC142381.2-201ENST00000566120 298 ntBASIC20.05■□□□□ 0.8
RIPK2O43353 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.05■□□□□ 0.8
RIPK2O43353 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.05■□□□□ 0.8
RIPK2O43353 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK2O43353 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK2O43353 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK2O43353 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK2O43353 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK2O43353 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RIPK2O43353 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK2O43353 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK2O43353 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RIPK2O43353 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.04■□□□□ 0.8
RIPK2O43353 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.04■□□□□ 0.8
RIPK2O43353 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.04■□□□□ 0.8
RIPK2O43353 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK2O43353 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK2O43353 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.04■□□□□ 0.8
RIPK2O43353 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK2O43353 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RIPK2O43353 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.04■□□□□ 0.8
RIPK2O43353 AC026471.1-201ENST00000564629 3026 ntBASIC20.04■□□□□ 0.8
RIPK2O43353 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RIPK2O43353 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK2O43353 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.04■□□□□ 0.8
RIPK2O43353 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK2O43353 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK2O43353 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
RIPK2O43353 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK2O43353 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK2O43353 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK2O43353 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK2O43353 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK2O43353 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK2O43353 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK2O43353 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK2O43353 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK2O43353 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK2O43353 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.04■□□□□ 0.8
RIPK2O43353 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RIPK2O43353 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RIPK2O43353 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK2O43353 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.03■□□□□ 0.8
RIPK2O43353 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RIPK2O43353 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
RIPK2O43353 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK2O43353 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
RIPK2O43353 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK2O43353 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK2O43353 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RIPK2O43353 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RIPK2O43353 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK2O43353 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
RIPK2O43353 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.03■□□□□ 0.8
RIPK2O43353 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK2O43353 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RIPK2O43353 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK2O43353 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK2O43353 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK2O43353 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RIPK2O43353 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIPK2O43353 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RIPK2O43353 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIPK2O43353 AC007613.1-201ENST00000572811 2597 ntBASIC20.02■□□□□ 0.8
RIPK2O43353 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RIPK2O43353 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIPK2O43353 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RIPK2O43353 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms