Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.03■□□□□ 0.32
PHF1O43189 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.03■□□□□ 0.32
PHF1O43189 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PHF1O43189 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHF1O43189 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PHF1O43189 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHF1O43189 AL162377.1-201ENST00000618844 1793 ntBASIC17.03■□□□□ 0.32
PHF1O43189 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PHF1O43189 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHF1O43189 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PHF1O43189 KRT18P68-201ENST00000392293 1000 ntBASIC17.03■□□□□ 0.32
PHF1O43189 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PHF1O43189 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.03■□□□□ 0.32
PHF1O43189 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.03■□□□□ 0.32
PHF1O43189 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.03■□□□□ 0.32
PHF1O43189 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.03■□□□□ 0.32
PHF1O43189 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.03■□□□□ 0.32
PHF1O43189 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PHF1O43189 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.03■□□□□ 0.32
PHF1O43189 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.03■□□□□ 0.32
PHF1O43189 CYP21A1P-202ENST00000354927 1481 ntBASIC17.03■□□□□ 0.32
PHF1O43189 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PHF1O43189 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHF1O43189 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHF1O43189 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PHF1O43189 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
PHF1O43189 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.02■□□□□ 0.32
PHF1O43189 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.02■□□□□ 0.32
PHF1O43189 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHF1O43189 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.02■□□□□ 0.32
PHF1O43189 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PHF1O43189 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.02■□□□□ 0.32
PHF1O43189 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHF1O43189 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.02■□□□□ 0.32
PHF1O43189 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHF1O43189 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHF1O43189 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHF1O43189 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PHF1O43189 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHF1O43189 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHF1O43189 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PHF1O43189 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.02■□□□□ 0.32
PHF1O43189 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHF1O43189 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.02■□□□□ 0.32
PHF1O43189 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.02■□□□□ 0.32
PHF1O43189 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.02■□□□□ 0.32
PHF1O43189 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.02■□□□□ 0.32
PHF1O43189 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.02■□□□□ 0.32
PHF1O43189 AL589743.5-201ENST00000616611 1050 ntBASIC17.02■□□□□ 0.32
PHF1O43189 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PHF1O43189 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PHF1O43189 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.02■□□□□ 0.32
PHF1O43189 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PHF1O43189 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PHF1O43189 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PHF1O43189 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.02■□□□□ 0.31
PHF1O43189 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.02■□□□□ 0.31
PHF1O43189 AC099778.1-201ENST00000568593 1911 ntBASIC17.02■□□□□ 0.31
PHF1O43189 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHF1O43189 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
PHF1O43189 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
PHF1O43189 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHF1O43189 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHF1O43189 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.01■□□□□ 0.31
PHF1O43189 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PHF1O43189 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHF1O43189 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHF1O43189 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.01■□□□□ 0.31
PHF1O43189 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.01■□□□□ 0.31
PHF1O43189 RPPH1-201ENST00000516869 333 ntBASIC17.01■□□□□ 0.31
PHF1O43189 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.01■□□□□ 0.31
PHF1O43189 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.01■□□□□ 0.31
PHF1O43189 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHF1O43189 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.01■□□□□ 0.31
PHF1O43189 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.01■□□□□ 0.31
PHF1O43189 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.01■□□□□ 0.31
PHF1O43189 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHF1O43189 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PHF1O43189 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.01■□□□□ 0.31
PHF1O43189 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHF1O43189 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHF1O43189 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PHF1O43189 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHF1O43189 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.01■□□□□ 0.31
PHF1O43189 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PHF1O43189 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PHF1O43189 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PHF1O43189 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.01■□□□□ 0.31
PHF1O43189 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17■□□□□ 0.31
PHF1O43189 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17■□□□□ 0.31
PHF1O43189 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PHF1O43189 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PHF1O43189 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
PHF1O43189 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17■□□□□ 0.31
PHF1O43189 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17■□□□□ 0.31
PHF1O43189 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PHF1O43189 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PHF1O43189 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PHF1O43189 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17■□□□□ 0.31
PHF1O43189 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms