Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTL8CO15255 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC13.18□□□□□ -0.3
RTL8CO15255 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTL8CO15255 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
RTL8CO15255 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTL8CO15255 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTL8CO15255 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTL8CO15255 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
RTL8CO15255 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTL8CO15255 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RTL8CO15255 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTL8CO15255 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RTL8CO15255 INGX-201ENST00000359239 846 ntBASIC13.18□□□□□ -0.3
RTL8CO15255 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.18□□□□□ -0.3
RTL8CO15255 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTL8CO15255 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTL8CO15255 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.18□□□□□ -0.3
RTL8CO15255 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTL8CO15255 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.18□□□□□ -0.3
RTL8CO15255 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.18□□□□□ -0.3
RTL8CO15255 AC011506.1-201ENST00000474329 610 ntBASIC13.18□□□□□ -0.3
RTL8CO15255 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.18□□□□□ -0.3
RTL8CO15255 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTL8CO15255 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.18□□□□□ -0.3
RTL8CO15255 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.18□□□□□ -0.3
RTL8CO15255 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.18□□□□□ -0.3
RTL8CO15255 FAM87A-204ENST00000613235 858 ntBASIC13.18□□□□□ -0.3
RTL8CO15255 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RTL8CO15255 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTL8CO15255 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTL8CO15255 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTL8CO15255 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTL8CO15255 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC13.18□□□□□ -0.3
RTL8CO15255 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTL8CO15255 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RTL8CO15255 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.17□□□□□ -0.3
RTL8CO15255 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 AL024507.2-201ENST00000606070 2574 ntBASIC13.17□□□□□ -0.3
RTL8CO15255 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
RTL8CO15255 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RTL8CO15255 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 KRT8P20-201ENST00000423953 1409 ntBASIC13.17□□□□□ -0.3
RTL8CO15255 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RTL8CO15255 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 CRYGFP-201ENST00000418459 633 ntBASIC13.17□□□□□ -0.3
RTL8CO15255 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.17□□□□□ -0.3
RTL8CO15255 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 AC128688.1-201ENST00000487626 519 ntBASIC13.17□□□□□ -0.3
RTL8CO15255 AC097488.1-201ENST00000507834 756 ntBASIC13.17□□□□□ -0.3
RTL8CO15255 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.17□□□□□ -0.3
RTL8CO15255 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 LINC01238-205ENST00000567549 1107 ntBASIC13.17□□□□□ -0.3
RTL8CO15255 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.17□□□□□ -0.3
RTL8CO15255 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RTL8CO15255 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 AL049796.1-201ENST00000565336 1766 ntBASIC13.17□□□□□ -0.3
RTL8CO15255 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTL8CO15255 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RTL8CO15255 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTL8CO15255 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTL8CO15255 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RTL8CO15255 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC13.16□□□□□ -0.3
RTL8CO15255 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTL8CO15255 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTL8CO15255 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RTL8CO15255 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RTL8CO15255 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTL8CO15255 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTL8CO15255 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.16□□□□□ -0.3
RTL8CO15255 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTL8CO15255 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTL8CO15255 AC117947.1-201ENST00000427448 529 ntBASIC13.16□□□□□ -0.3
RTL8CO15255 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTL8CO15255 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RTL8CO15255 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.16□□□□□ -0.3
RTL8CO15255 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.16□□□□□ -0.3
RTL8CO15255 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RTL8CO15255 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RTL8CO15255 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RTL8CO15255 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC13.16□□□□□ -0.3
RTL8CO15255 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTL8CO15255 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTL8CO15255 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RTL8CO15255 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms