Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.35■□□□□ 0.69
EIF3FO00303 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
EIF3FO00303 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.34■□□□□ 0.69
EIF3FO00303 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.34■□□□□ 0.69
EIF3FO00303 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
EIF3FO00303 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.34■□□□□ 0.69
EIF3FO00303 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
EIF3FO00303 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.34■□□□□ 0.69
EIF3FO00303 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
EIF3FO00303 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
EIF3FO00303 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EIF3FO00303 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
EIF3FO00303 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
EIF3FO00303 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
EIF3FO00303 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EIF3FO00303 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.34■□□□□ 0.69
EIF3FO00303 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
EIF3FO00303 RPS2P52-201ENST00000469610 820 ntBASIC19.34■□□□□ 0.69
EIF3FO00303 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.34■□□□□ 0.69
EIF3FO00303 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.34■□□□□ 0.69
EIF3FO00303 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.34■□□□□ 0.69
EIF3FO00303 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EIF3FO00303 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
EIF3FO00303 PCDHAC2-203ENST00000615316 3011 ntBASIC19.34■□□□□ 0.69
EIF3FO00303 TREX1-205ENST00000625293 1783 ntBASIC19.34■□□□□ 0.69
EIF3FO00303 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EIF3FO00303 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
EIF3FO00303 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
EIF3FO00303 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
EIF3FO00303 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.33■□□□□ 0.69
EIF3FO00303 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.69
EIF3FO00303 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
EIF3FO00303 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
EIF3FO00303 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
EIF3FO00303 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
EIF3FO00303 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
EIF3FO00303 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.33■□□□□ 0.68
EIF3FO00303 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.33■□□□□ 0.68
EIF3FO00303 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.33■□□□□ 0.68
EIF3FO00303 AC120498.8-201ENST00000614275 531 ntBASIC19.33■□□□□ 0.68
EIF3FO00303 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
EIF3FO00303 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
EIF3FO00303 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
EIF3FO00303 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
EIF3FO00303 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
EIF3FO00303 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.33■□□□□ 0.68
EIF3FO00303 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
EIF3FO00303 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.33■□□□□ 0.68
EIF3FO00303 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
EIF3FO00303 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
EIF3FO00303 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
EIF3FO00303 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.33■□□□□ 0.68
EIF3FO00303 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
EIF3FO00303 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EIF3FO00303 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EIF3FO00303 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
EIF3FO00303 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.32■□□□□ 0.68
EIF3FO00303 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.32■□□□□ 0.68
EIF3FO00303 AC007952.6-201ENST00000573168 2673 ntBASIC19.32■□□□□ 0.68
EIF3FO00303 AC003957.1-201ENST00000625108 2673 ntBASIC19.32■□□□□ 0.68
EIF3FO00303 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
EIF3FO00303 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EIF3FO00303 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.32■□□□□ 0.68
EIF3FO00303 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
EIF3FO00303 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.32■□□□□ 0.68
EIF3FO00303 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.32■□□□□ 0.68
EIF3FO00303 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
EIF3FO00303 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.32■□□□□ 0.68
EIF3FO00303 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
EIF3FO00303 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
EIF3FO00303 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.32■□□□□ 0.68
EIF3FO00303 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
EIF3FO00303 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.32■□□□□ 0.68
EIF3FO00303 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
EIF3FO00303 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.32■□□□□ 0.68
EIF3FO00303 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
EIF3FO00303 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EIF3FO00303 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
EIF3FO00303 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EIF3FO00303 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EIF3FO00303 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.31■□□□□ 0.68
EIF3FO00303 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EIF3FO00303 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EIF3FO00303 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.31■□□□□ 0.68
EIF3FO00303 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EIF3FO00303 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EIF3FO00303 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.31■□□□□ 0.68
EIF3FO00303 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EIF3FO00303 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.31■□□□□ 0.68
EIF3FO00303 SOX15-203ENST00000570788 1093 ntBASIC19.31■□□□□ 0.68
EIF3FO00303 AL121829.2-201ENST00000620908 328 ntBASIC19.31■□□□□ 0.68
EIF3FO00303 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EIF3FO00303 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.31■□□□□ 0.68
EIF3FO00303 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.31■□□□□ 0.68
EIF3FO00303 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EIF3FO00303 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
EIF3FO00303 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EIF3FO00303 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EIF3FO00303 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EIF3FO00303 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms