Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC01548A6NM66 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.62■□□□□ 0.09
LINC01548A6NM66 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
LINC01548A6NM66 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LINC01548A6NM66 AC116351.2-201ENST00000606540 1585 ntBASIC15.62■□□□□ 0.09
LINC01548A6NM66 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC01548A6NM66 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC01548A6NM66 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01548A6NM66 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01548A6NM66 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC01548A6NM66 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01548A6NM66 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01548A6NM66 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01548A6NM66 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01548A6NM66 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
LINC01548A6NM66 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC15.61■□□□□ 0.09
LINC01548A6NM66 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.61■□□□□ 0.09
LINC01548A6NM66 AC124016.1-201ENST00000609552 612 ntBASIC15.61■□□□□ 0.09
LINC01548A6NM66 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
LINC01548A6NM66 AL121906.2-201ENST00000621597 723 ntBASIC15.61■□□□□ 0.09
LINC01548A6NM66 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LINC01548A6NM66 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01548A6NM66 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
LINC01548A6NM66 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
LINC01548A6NM66 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
LINC01548A6NM66 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01548A6NM66 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
LINC01548A6NM66 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
LINC01548A6NM66 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
LINC01548A6NM66 TFP1-202ENST00000475455 1573 ntBASIC15.61■□□□□ 0.09
LINC01548A6NM66 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
LINC01548A6NM66 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.6■□□□□ 0.09
LINC01548A6NM66 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LINC01548A6NM66 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01548A6NM66 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LINC01548A6NM66 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01548A6NM66 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01548A6NM66 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01548A6NM66 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01548A6NM66 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01548A6NM66 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01548A6NM66 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.6■□□□□ 0.09
LINC01548A6NM66 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.6■□□□□ 0.09
LINC01548A6NM66 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01548A6NM66 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.6■□□□□ 0.09
LINC01548A6NM66 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.6■□□□□ 0.09
LINC01548A6NM66 FAM197Y4-202ENST00000622692 608 ntBASIC15.6■□□□□ 0.09
LINC01548A6NM66 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
LINC01548A6NM66 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC15.6■□□□□ 0.09
LINC01548A6NM66 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.6■□□□□ 0.09
LINC01548A6NM66 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01548A6NM66 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
LINC01548A6NM66 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01548A6NM66 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01548A6NM66 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
LINC01548A6NM66 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
LINC01548A6NM66 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01548A6NM66 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01548A6NM66 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01548A6NM66 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
LINC01548A6NM66 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01548A6NM66 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01548A6NM66 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01548A6NM66 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01548A6NM66 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01548A6NM66 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01548A6NM66 AC239809.2-201ENST00000415381 517 ntBASIC15.59■□□□□ 0.09
LINC01548A6NM66 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01548A6NM66 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 PRKY-204ENST00000533551 1019 ntBASIC15.59■□□□□ 0.09
LINC01548A6NM66 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01548A6NM66 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01548A6NM66 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01548A6NM66 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01548A6NM66 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01548A6NM66 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
LINC01548A6NM66 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
LINC01548A6NM66 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
LINC01548A6NM66 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.58■□□□□ 0.09
LINC01548A6NM66 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms