Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.97□□□□□ -0.17
LINC01546A6NGU7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 AC138907.5-202ENST00000569484 235 ntBASIC13.97□□□□□ -0.17
LINC01546A6NGU7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 TEX21P-204ENST00000641479 1693 ntBASIC13.97□□□□□ -0.17
LINC01546A6NGU7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 KRT8P17-201ENST00000453110 1448 ntBASIC13.97□□□□□ -0.17
LINC01546A6NGU7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC01546A6NGU7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01546A6NGU7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01546A6NGU7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01546A6NGU7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01546A6NGU7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01546A6NGU7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC01546A6NGU7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01546A6NGU7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01546A6NGU7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.96□□□□□ -0.17
LINC01546A6NGU7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LINC01546A6NGU7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01546A6NGU7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC13.96□□□□□ -0.17
LINC01546A6NGU7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LINC01546A6NGU7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01546A6NGU7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01546A6NGU7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC01546A6NGU7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LINC01546A6NGU7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
LINC01546A6NGU7 FP475955.4-201ENST00000623131 1990 ntBASIC13.96□□□□□ -0.18
LINC01546A6NGU7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
LINC01546A6NGU7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC13.96□□□□□ -0.18
LINC01546A6NGU7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LINC01546A6NGU7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.18
LINC01546A6NGU7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC01546A6NGU7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.96□□□□□ -0.18
LINC01546A6NGU7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 AL512353.2-201ENST00000448759 1962 ntBASIC13.95□□□□□ -0.18
LINC01546A6NGU7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 AC091799.1-201ENST00000422823 811 ntBASIC13.95□□□□□ -0.18
LINC01546A6NGU7 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC01546A6NGU7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 ABALON-201ENST00000629058 1903 ntBASIC13.94□□□□□ -0.18
LINC01546A6NGU7 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC01546A6NGU7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms