Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
TRIM49BA6NDI0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
TRIM49BA6NDI0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM49BA6NDI0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
TRIM49BA6NDI0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM49BA6NDI0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM49BA6NDI0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
TRIM49BA6NDI0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
TRIM49BA6NDI0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM49BA6NDI0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM49BA6NDI0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM49BA6NDI0 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM49BA6NDI0 DUSP5P2-201ENST00000426873 1033 ntBASIC21.77■■□□□ 1.08
TRIM49BA6NDI0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM49BA6NDI0 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.77■■□□□ 1.08
TRIM49BA6NDI0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM49BA6NDI0 AL121832.2-201ENST00000610979 668 ntBASIC21.77■■□□□ 1.08
TRIM49BA6NDI0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM49BA6NDI0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM49BA6NDI0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
TRIM49BA6NDI0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.77■■□□□ 1.07
TRIM49BA6NDI0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
TRIM49BA6NDI0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.77■■□□□ 1.07
TRIM49BA6NDI0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
TRIM49BA6NDI0 AC098818.2-201ENST00000564925 2320 ntBASIC21.77■■□□□ 1.07
TRIM49BA6NDI0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM49BA6NDI0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM49BA6NDI0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
TRIM49BA6NDI0 Z82202.1-201ENST00000623446 1880 ntBASIC21.75■■□□□ 1.07
TRIM49BA6NDI0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM49BA6NDI0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM49BA6NDI0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM49BA6NDI0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TRIM49BA6NDI0 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.75■■□□□ 1.07
TRIM49BA6NDI0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.75■■□□□ 1.07
TRIM49BA6NDI0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.75■■□□□ 1.07
TRIM49BA6NDI0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.75■■□□□ 1.07
TRIM49BA6NDI0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM49BA6NDI0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
TRIM49BA6NDI0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
TRIM49BA6NDI0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.75■■□□□ 1.07
TRIM49BA6NDI0 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM49BA6NDI0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 AC018553.1-201ENST00000616682 1458 ntBASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM49BA6NDI0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM49BA6NDI0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM49BA6NDI0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM49BA6NDI0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TRIM49BA6NDI0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM49BA6NDI0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM49BA6NDI0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.73■■□□□ 1.07
TRIM49BA6NDI0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.73■■□□□ 1.07
TRIM49BA6NDI0 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.73■■□□□ 1.07
TRIM49BA6NDI0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM49BA6NDI0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms