Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 HCG11-201ENST00000411553 5696 ntBASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
DUXBA0A1W2PPF3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 AC096631.2-201ENST00000436136 790 ntBASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 KRT8P20-201ENST00000423953 1409 ntBASIC16.11■□□□□ 0.17
DUXBA0A1W2PPF3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 AL136967.2-201ENST00000623968 743 ntBASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
DUXBA0A1W2PPF3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DUXBA0A1W2PPF3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
DUXBA0A1W2PPF3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
DUXBA0A1W2PPF3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
DUXBA0A1W2PPF3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
DUXBA0A1W2PPF3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.09■□□□□ 0.17
DUXBA0A1W2PPF3 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DUXBA0A1W2PPF3 AC027612.3-201ENST00000413684 1047 ntBASIC16.09■□□□□ 0.17
DUXBA0A1W2PPF3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.09■□□□□ 0.17
DUXBA0A1W2PPF3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.09■□□□□ 0.17
DUXBA0A1W2PPF3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
DUXBA0A1W2PPF3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.09■□□□□ 0.17
DUXBA0A1W2PPF3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.09■□□□□ 0.17
DUXBA0A1W2PPF3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
DUXBA0A1W2PPF3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
DUXBA0A1W2PPF3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms