Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 AC141257.4-201ENST00000634557 245 ntBASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 AC136944.6-201ENST00000634818 245 ntBASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 HLA-A-209ENST00000638375 975 ntBASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC163A0A0D9SF12 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 KRT18P48-201ENST00000434763 852 ntBASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 AC008040.2-201ENST00000461049 708 ntBASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.61■□□□□ 0.73
CCDC163A0A0D9SF12 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 FAM86EP-206ENST00000510506 987 ntBASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 AL023803.3-201ENST00000615559 522 ntBASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.6■□□□□ 0.73
CCDC163A0A0D9SF12 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CCDC163A0A0D9SF12 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC163A0A0D9SF12 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC163A0A0D9SF12 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC163A0A0D9SF12 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC163A0A0D9SF12 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CCDC163A0A0D9SF12 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC163A0A0D9SF12 PCED1CP-201ENST00000419887 785 ntBASIC19.59■□□□□ 0.73
CCDC163A0A0D9SF12 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC163A0A0D9SF12 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
CCDC163A0A0D9SF12 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC163A0A0D9SF12 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC163A0A0D9SF12 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC163A0A0D9SF12 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC163A0A0D9SF12 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC163A0A0D9SF12 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC163A0A0D9SF12 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC163A0A0D9SF12 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC163A0A0D9SF12 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC163A0A0D9SF12 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC163A0A0D9SF12 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC163A0A0D9SF12 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC163A0A0D9SF12 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC163A0A0D9SF12 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.58■□□□□ 0.72
CCDC163A0A0D9SF12 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC163A0A0D9SF12 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC163A0A0D9SF12 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC163A0A0D9SF12 CA15P1-201ENST00000481698 905 ntBASIC19.58■□□□□ 0.72
CCDC163A0A0D9SF12 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC163A0A0D9SF12 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms