Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV5-4A0A0C4DH59 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV5-4A0A0C4DH59 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.49■□□□□ 0.71
TRBV5-4A0A0C4DH59 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRBV5-4A0A0C4DH59 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-4A0A0C4DH59 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-4A0A0C4DH59 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-4A0A0C4DH59 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-4A0A0C4DH59 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
TRBV5-4A0A0C4DH59 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-4A0A0C4DH59 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-4A0A0C4DH59 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-4A0A0C4DH59 AP006587.1-201ENST00000534129 1502 ntBASIC19.48■□□□□ 0.71
TRBV5-4A0A0C4DH59 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.48■□□□□ 0.71
TRBV5-4A0A0C4DH59 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.48■□□□□ 0.71
TRBV5-4A0A0C4DH59 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-4A0A0C4DH59 AC073648.6-201ENST00000641589 218 ntBASIC19.48■□□□□ 0.71
TRBV5-4A0A0C4DH59 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.48■□□□□ 0.71
TRBV5-4A0A0C4DH59 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-4A0A0C4DH59 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-4A0A0C4DH59 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-4A0A0C4DH59 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.48■□□□□ 0.71
TRBV5-4A0A0C4DH59 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV5-4A0A0C4DH59 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 YBX1P10-201ENST00000444752 975 ntBASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 AC006058.3-201ENST00000606217 1069 ntBASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV5-4A0A0C4DH59 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.46■□□□□ 0.71
TRBV5-4A0A0C4DH59 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.46■□□□□ 0.71
TRBV5-4A0A0C4DH59 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms