Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 AL390961.4-201ENST00000623958 2535 ntBASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 DPP3P2-201ENST00000416030 1696 ntBASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 KRT8P33-201ENST00000508125 1423 ntBASIC13.05□□□□□ -0.32
TRAV13-2A0A0B4J235 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 LTB4R2-202ENST00000528054 3092 ntBASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 AC005332.8-201ENST00000622750 2735 ntBASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TRAV13-2A0A0B4J235 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 MBP-237ENST00000579129 1052 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV13-2A0A0B4J235 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms