Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC016691.1-201ENST00000441321 413 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 AC006463.1-201ENST00000445929 232 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 RPS4XP19-201ENST00000460237 736 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 RN7SL401P-201ENST00000470065 298 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 RN7SL370P-201ENST00000470869 295 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 MTND1P3-201ENST00000484956 952 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 AC090096.1-201ENST00000489168 390 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 PSMA2P2-201ENST00000504319 686 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 AC106799.2-201ENST00000507435 721 ntTSL 5 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 AC068587.4-201ENST00000533893 186 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 LINC01227-202ENST00000561719 755 ntTSL 2 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 TTC39A-AS1-202ENST00000568425 554 ntTSL 3 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 AC019322.1-201ENST00000571869 389 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 AL354733.2-205ENST00000590813 621 ntTSL 5 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 AC003098.1-201ENST00000591540 494 ntTSL 3 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 ZNF615-206ENST00000597747 704 ntTSL 5 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 ZNF98-205ENST00000601553 566 ntTSL 3 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 AC008638.3-201ENST00000603341 463 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 Metazoa_SRP.165-201ENST00000615681 260 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 GZMB-209ENST00000616551 559 ntTSL 2 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 CPSF7-226ENST00000626926 306 ntTSL 5 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USB1Q9BQ65 MAPK10-325ENST00000641537 2623 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 PIGN-201ENST00000357637 4723 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 CKAP2P1-201ENST00000555477 2049 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 HEATR9-204ENST00000603870 1829 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 CPA4-201ENST00000222482 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USB1Q9BQ65 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USB1Q9BQ65 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
USB1Q9BQ65 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
USB1Q9BQ65 AC239859.1-201ENST00000449715 2594 ntBASIC7.84□□□□□ -1.15
USB1Q9BQ65 AC079466.1-201ENST00000587961 4453 ntTSL 2 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
USB1Q9BQ65 TMPPE-202ENST00000416695 3451 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
USB1Q9BQ65 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
USB1Q9BQ65 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
USB1Q9BQ65 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
USB1Q9BQ65 ZNF410-224ENST00000615736 1551 ntTSL 5 BASIC7.84□□□□□ -1.15
USB1Q9BQ65 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.16
USB1Q9BQ65 UTRN-203ENST00000367526 3220 ntTSL 5 BASIC7.84□□□□□ -1.16
USB1Q9BQ65 CARF-201ENST00000320443 5209 ntTSL 2 BASIC7.84□□□□□ -1.16
USB1Q9BQ65 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
USB1Q9BQ65 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
USB1Q9BQ65 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC7.84□□□□□ -1.16
USB1Q9BQ65 TP63-212ENST00000456148 1749 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 IBSP-201ENST00000226284 1546 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 CAMK2D-214ENST00000515496 1533 ntTSL 5 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 CDC27-204ENST00000527547 2579 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 C2orf42-205ENST00000420306 2193 ntAPPRIS P1 TSL 2 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 VSIG4-204ENST00000455586 2190 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 XRCC6P1-201ENST00000420392 1805 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 OR1S1-202ENST00000641544 1474 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 LIMS1-203ENST00000393310 4392 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 CTH-201ENST00000346806 1196 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 SNRNP40-202ENST00000373720 1087 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 PAGE5-202ENST00000374952 428 ntTSL 5 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 CUBN-201ENST00000377823 705 ntTSL 3 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 MIR296-201ENST00000385215 80 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 RNU2-62P-201ENST00000410868 191 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 AGBL5-IT1-201ENST00000411862 339 ntTSL 3 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 OR51A3P-201ENST00000413596 924 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 AL160290.1-201ENST00000415509 416 ntTSL 3 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 NANOGP6-201ENST00000429190 847 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 RPL31P35-201ENST00000431058 377 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 RPL7P29-201ENST00000437151 728 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC245884.3-201ENST00000445491 218 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC002064.1-201ENST00000445784 733 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
USB1Q9BQ65 FAR2P3-205ENST00000447059 604 ntBASIC7.83□□□□□ -1.16
USB1Q9BQ65 AL096855.1-201ENST00000449895 516 ntTSL 3 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.83□□□□□ -1.16
USB1Q9BQ65 RN7SKP241-201ENST00000464584 291 ntBASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms