Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 NR1I2-203ENST00000466380 4306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 CTC1-201ENST00000315684 7021 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 ELP3-219ENST00000537665 3053 ntTSL 2 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 WDPCP-206ENST00000409562 3544 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 HCRTR2-201ENST00000370862 1837 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 GNE-206ENST00000543356 2576 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 ELOVL2-201ENST00000354666 3997 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 SNRPEP2-201ENST00000397592 279 ntBASIC8.5□□□□□ -1.05
PHOX2BQ99453 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 RPL23AP47-201ENST00000408017 460 ntBASIC8.5□□□□□ -1.05
PHOX2BQ99453 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 AL365226.2-201ENST00000418403 397 ntTSL 2 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 SNRPEP10-201ENST00000420249 274 ntBASIC8.5□□□□□ -1.05
PHOX2BQ99453 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 MED15P9-201ENST00000424716 533 ntBASIC8.5□□□□□ -1.05
PHOX2BQ99453 AC093716.1-201ENST00000435923 377 ntBASIC8.5□□□□□ -1.05
PHOX2BQ99453 LINC00328-2P-201ENST00000436585 219 ntBASIC8.5□□□□□ -1.05
PHOX2BQ99453 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 COX6CP18-201ENST00000448769 222 ntBASIC8.5□□□□□ -1.05
PHOX2BQ99453 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 AL391361.2-202ENST00000454826 439 ntTSL 5 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 AC010307.1-201ENST00000467206 836 ntBASIC8.5□□□□□ -1.05
PHOX2BQ99453 RPS10P28-201ENST00000480396 498 ntBASIC8.5□□□□□ -1.05
PHOX2BQ99453 AC034207.1-201ENST00000506742 948 ntBASIC8.5□□□□□ -1.05
PHOX2BQ99453 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 RNU6-327P-201ENST00000516270 127 ntBASIC8.5□□□□□ -1.05
PHOX2BQ99453 AC084337.1-201ENST00000524809 686 ntBASIC8.5□□□□□ -1.05
PHOX2BQ99453 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 CTNNA2-217ENST00000540488 2792 ntTSL 5 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 AL390334.1-201ENST00000556395 450 ntBASIC8.5□□□□□ -1.05
PHOX2BQ99453 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 WDR61-205ENST00000558459 884 ntTSL 3 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 AC112191.3-201ENST00000604371 277 ntBASIC8.5□□□□□ -1.05
PHOX2BQ99453 BX323046.1-201ENST00000610145 535 ntBASIC8.5□□□□□ -1.05
PHOX2BQ99453 MIR6780B-201ENST00000610307 79 ntBASIC8.5□□□□□ -1.05
PHOX2BQ99453 AC245505.3-201ENST00000616788 358 ntBASIC8.5□□□□□ -1.05
PHOX2BQ99453 BX005040.2-201ENST00000620504 370 ntBASIC8.5□□□□□ -1.05
PHOX2BQ99453 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 MAPK10-202ENST00000359221 2668 ntTSL 5 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 KIAA1841-203ENST00000402291 4516 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 GLT8D1-202ENST00000394783 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 AC090229.1-201ENST00000590983 1609 ntBASIC8.5□□□□□ -1.05
PHOX2BQ99453 AL162171.3-201ENST00000617439 3178 ntBASIC8.5□□□□□ -1.05
PHOX2BQ99453 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 AC023790.2-201ENST00000543321 2403 ntTSL 5 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 AL161636.1-201ENST00000427145 2254 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
PHOX2BQ99453 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
PHOX2BQ99453 AL645937.1-201ENST00000641739 1652 ntBASIC8.49□□□□□ -1.05
PHOX2BQ99453 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
PHOX2BQ99453 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC8.49□□□□□ -1.05
PHOX2BQ99453 AC138915.3-201ENST00000562908 1389 ntBASIC8.49□□□□□ -1.05
PHOX2BQ99453 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
PHOX2BQ99453 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
PHOX2BQ99453 ABRAXAS1-206ENST00000506553 1869 ntTSL 5 BASIC8.49□□□□□ -1.05
PHOX2BQ99453 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
PHOX2BQ99453 KIAA0391-205ENST00000603544 2232 ntTSL 5 BASIC8.49□□□□□ -1.05
PHOX2BQ99453 AC011330.1-201ENST00000510070 3235 ntBASIC8.49□□□□□ -1.05
PHOX2BQ99453 ADD2-204ENST00000407644 3741 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
PHOX2BQ99453 GOSR2-234ENST00000640138 3408 ntTSL 5 BASIC8.49□□□□□ -1.05
PHOX2BQ99453 TNPO3-203ENST00000471234 3283 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
PHOX2BQ99453 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
PHOX2BQ99453 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
PHOX2BQ99453 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC8.49□□□□□ -1.05
PHOX2BQ99453 PPP1R14D-201ENST00000299174 757 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms