Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
HPS1Q92902 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC7.74□□□□□ -1.17
HPS1Q92902 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
HPS1Q92902 HEPACAM2-204ENST00000453812 1869 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
HPS1Q92902 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
HPS1Q92902 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HPS1Q92902 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HPS1Q92902 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HPS1Q92902 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.74□□□□□ -1.17
HPS1Q92902 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HPS1Q92902 FLT1-206ENST00000615611 1476 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HPS1Q92902 LINC02357-201ENST00000637313 1622 ntTSL 5 BASIC7.74□□□□□ -1.17
HPS1Q92902 GFRAL-201ENST00000340465 1911 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
HPS1Q92902 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
HPS1Q92902 MLH1-222ENST00000539477 2366 ntTSL 2 BASIC7.74□□□□□ -1.17
HPS1Q92902 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
HPS1Q92902 SWT1-202ENST00000367501 3001 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
HPS1Q92902 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
HPS1Q92902 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC7.73□□□□□ -1.17
HPS1Q92902 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
HPS1Q92902 CD59-202ENST00000395850 1889 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
HPS1Q92902 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
HPS1Q92902 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
HPS1Q92902 PSG9-205ENST00000443718 1421 ntTSL 2 BASIC7.73□□□□□ -1.17
HPS1Q92902 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HPS1Q92902 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HPS1Q92902 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HPS1Q92902 AP000769.1-204ENST00000309775 800 ntTSL 5 BASIC7.73□□□□□ -1.17
HPS1Q92902 OR51G2-201ENST00000322013 1023 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
HPS1Q92902 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
HPS1Q92902 RPL21P132-201ENST00000331267 462 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HPS1Q92902 RNU1-35P-201ENST00000362782 153 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HPS1Q92902 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HPS1Q92902 RABL2A-201ENST00000376439 623 ntTSL 5 BASIC7.73□□□□□ -1.17
HPS1Q92902 RNU6-505P-201ENST00000384427 107 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 AL031864.1-201ENST00000392075 423 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 AL109918.1-202ENST00000406724 436 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 JKAMPP1-201ENST00000413804 919 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 Z98751.1-201ENST00000413827 381 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 MIATNB-201ENST00000417083 706 ntTSL 3 BASIC7.73□□□□□ -1.17
HPS1Q92902 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.73□□□□□ -1.17
HPS1Q92902 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.73□□□□□ -1.17
HPS1Q92902 C4orf51-201ENST00000438731 932 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
HPS1Q92902 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC7.73□□□□□ -1.17
HPS1Q92902 C3orf67-AS1-201ENST00000463703 562 ntTSL 4 BASIC7.73□□□□□ -1.17
HPS1Q92902 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC7.73□□□□□ -1.17
HPS1Q92902 RN7SL280P-201ENST00000496490 288 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 AC139783.2-201ENST00000504847 1145 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC7.73□□□□□ -1.17
HPS1Q92902 AC010457.1-202ENST00000510137 337 ntTSL 2 BASIC7.73□□□□□ -1.17
HPS1Q92902 AC008429.2-201ENST00000523057 864 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC7.73□□□□□ -1.17
HPS1Q92902 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC7.73□□□□□ -1.17
HPS1Q92902 ZNF252P-203ENST00000527222 876 ntTSL 2 BASIC7.73□□□□□ -1.17
HPS1Q92902 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC7.73□□□□□ -1.17
HPS1Q92902 AC090424.1-201ENST00000535243 736 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 Metazoa_SRP.11-201ENST00000537819 269 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 PGA4-202ENST00000537932 840 ntTSL 2 BASIC7.73□□□□□ -1.17
HPS1Q92902 PGA3-204ENST00000538258 867 ntTSL 2 BASIC7.73□□□□□ -1.17
HPS1Q92902 PGA3-207ENST00000543125 968 ntTSL 2 BASIC7.73□□□□□ -1.17
HPS1Q92902 AC006927.1-201ENST00000544818 498 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 PGA4-206ENST00000544899 867 ntTSL 2 BASIC7.73□□□□□ -1.17
HPS1Q92902 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HPS1Q92902 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.73□□□□□ -1.17
HPS1Q92902 AP001004.1-201ENST00000582468 324 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 ZNF98-205ENST00000601553 566 ntTSL 3 BASIC7.73□□□□□ -1.17
HPS1Q92902 XIAPP1-201ENST00000603162 600 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 AC008638.3-201ENST00000603341 463 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 AC016925.2-201ENST00000605108 242 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC7.73□□□□□ -1.17
HPS1Q92902 AC107214.2-201ENST00000608204 634 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 Metazoa_SRP.162-201ENST00000613066 277 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 AL445670.1-201ENST00000618889 801 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7.73□□□□□ -1.17
HPS1Q92902 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC7.73□□□□□ -1.17
HPS1Q92902 AC018692.2-201ENST00000624130 348 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 LINC01354-202ENST00000435574 2860 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HPS1Q92902 MIR4458HG-203ENST00000606459 3239 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HPS1Q92902 PXYLP1-204ENST00000504264 1773 ntTSL 2 BASIC7.73□□□□□ -1.17
HPS1Q92902 RBBP9-201ENST00000337227 3861 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HPS1Q92902 PACRG-201ENST00000337019 1619 ntTSL 2 BASIC7.73□□□□□ -1.17
HPS1Q92902 AL096816.1-201ENST00000623300 2920 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 ZNF670-ZNF695-202ENST00000474541 2751 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
HPS1Q92902 CEACAM1-204ENST00000358394 1484 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HPS1Q92902 AC009948.5-201ENST00000624360 4406 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 LINC00598-213ENST00000637438 1456 ntTSL 5 BASIC7.73□□□□□ -1.17
HPS1Q92902 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HPS1Q92902 AC068044.1-201ENST00000441585 1978 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7.73□□□□□ -1.17
HPS1Q92902 KRTAP9-6-201ENST00000391355 1303 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
HPS1Q92902 AP003119.3-201ENST00000566747 4192 ntBASIC7.73□□□□□ -1.17
HPS1Q92902 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
HPS1Q92902 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
HPS1Q92902 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
HPS1Q92902 PSMA5-206ENST00000538610 1504 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HPS1Q92902 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
HPS1Q92902 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
HPS1Q92902 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms