Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 RN7SKP77-201ENST00000363261 353 ntBASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 AC004815.1-201ENST00000484185 331 ntBASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 RNA5SP92-201ENST00000516437 110 ntBASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 AC006530.1-201ENST00000555980 571 ntBASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC9.38□□□□□ -0.91
CFAP43Q8NDM7 MAPK10-338ENST00000641647 3362 ntBASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 AOX3P-204ENST00000491025 2107 ntBASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 AC016739.1-201ENST00000405359 345 ntBASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 CT45A11P-201ENST00000448043 1134 ntBASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 AC091685.2-201ENST00000454924 864 ntBASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 HIGD1AP5-201ENST00000529959 259 ntBASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 AC007204.2-201ENST00000615022 616 ntBASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
CFAP43Q8NDM7 Z82209.2-201ENST00000623410 2012 ntBASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 OR10R3P-201ENST00000361688 942 ntBASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 RNA5SP507-201ENST00000363603 121 ntBASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 AL133270.1-201ENST00000402635 279 ntBASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 MRM2-202ENST00000407040 582 ntTSL 3 BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 MIR1286-201ENST00000408112 78 ntBASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 RPS12P17-201ENST00000438591 377 ntBASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 CASP5-209ENST00000531367 879 ntTSL 5 BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 AL049840.6-201ENST00000604583 345 ntBASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 CAST-222ENST00000508579 1758 ntTSL 2 BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 AC089998.1-201ENST00000548575 3141 ntBASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 AL590004.4-201ENST00000566733 7060 ntBASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 OR2W4P-201ENST00000406496 926 ntBASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 PTCD2P2-201ENST00000415579 1095 ntBASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 AL022319.1-201ENST00000458183 1167 ntBASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 OR5D15P-201ENST00000531671 942 ntBASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 MIR4301-201ENST00000577203 66 ntBASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 AC024589.2-201ENST00000605642 1294 ntBASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 RPSAP73-201ENST00000614820 330 ntBASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
CFAP43Q8NDM7 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CFAP43Q8NDM7 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
CFAP43Q8NDM7 CCDC73-203ENST00000531481 4381 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
CFAP43Q8NDM7 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
CFAP43Q8NDM7 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms