Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AP002892.2-201ENST00000544195 560 ntTSL 4 BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AC137768.1-201ENST00000549998 553 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AC090774.3-201ENST00000578666 742 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AC004257.1-201ENST00000593588 277 ntTSL 5 BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AC005084.1-201ENST00000605160 304 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AC007742.2-201ENST00000618226 398 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AC009704.2-201ENST00000618739 483 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AC092650.2-201ENST00000619984 902 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AC009093.6-201ENST00000622268 553 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 AC005691.1-201ENST00000624723 401 ntBASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 GABRP-201ENST00000265294 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 CELF1-202ENST00000358597 2108 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
DEPDC4Q8N2C3 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 SGK1-223ENST00000528577 1850 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC108099.1-201ENST00000564402 3258 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 MAPK10-377ENST00000642006 2752 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 MFSD1P1-201ENST00000576210 1327 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 TFF1-201ENST00000291527 551 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 ZNF254-201ENST00000339642 511 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 RNU6-1066P-201ENST00000363573 105 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 CENPW-202ENST00000368326 443 ntTSL 2 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 Y_RNA.450-201ENST00000384198 113 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 TRBV7-5-201ENST00000390382 345 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 CES5AP1-201ENST00000400418 859 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 OR13D3P-201ENST00000412501 937 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 OR51A5P-201ENST00000415429 942 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AL121990.1-201ENST00000417605 591 ntTSL 3 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 RPS23P8-201ENST00000429775 330 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 RPL12P14-201ENST00000431782 490 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 FTH1P20-201ENST00000434913 548 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 SDHDP2-201ENST00000436937 465 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC097527.1-201ENST00000437031 530 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 ARMC4P1-201ENST00000438905 707 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 LINC02093-201ENST00000440522 485 ntTSL 5 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC018738.1-201ENST00000441378 210 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC107983.1-201ENST00000442562 210 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 LINC01713-201ENST00000445589 932 ntTSL 3 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 RPL35P4-201ENST00000446039 322 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AL356310.1-201ENST00000452024 585 ntTSL 3 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 DAP3-209ENST00000465375 729 ntTSL 2 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 RN7SL448P-201ENST00000475566 295 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 BX293995.1-201ENST00000502880 755 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC024022.1-203ENST00000515392 478 ntTSL 3 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC002428.1-201ENST00000523722 771 ntTSL 3 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AP000757.1-202ENST00000525260 891 ntTSL 3 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 SLC5A4P1-201ENST00000532944 612 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 PRB4-203ENST00000535904 796 ntAPPRIS P3 TSL 2 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC005871.2-201ENST00000549104 526 ntTSL 4 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 ACTN1-AS1-201ENST00000553944 484 ntTSL 3 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC008991.1-201ENST00000591285 537 ntTSL 4 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC174071.1-201ENST00000603069 517 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC090578.1-201ENST00000604955 591 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC243772.3-202ENST00000609662 1148 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AL606760.4-201ENST00000617613 718 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AL121890.2-201ENST00000617644 465 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AL139089.1-201ENST00000620372 975 ntBASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 Z98752.3-201ENST00000621802 566 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
DEPDC4Q8N2C3 AC138649.3-201ENST00000622154 254 ntBASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms