Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.44□□□□□ -1.38
RFWD3Q6PCD5 RN7SL261P-201ENST00000613441 282 ntBASIC6.44□□□□□ -1.38
RFWD3Q6PCD5 AL445649.1-201ENST00000615941 691 ntBASIC6.44□□□□□ -1.38
RFWD3Q6PCD5 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
RFWD3Q6PCD5 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RFWD3Q6PCD5 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
RFWD3Q6PCD5 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.44□□□□□ -1.38
RFWD3Q6PCD5 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.44□□□□□ -1.38
RFWD3Q6PCD5 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RFWD3Q6PCD5 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.44□□□□□ -1.38
RFWD3Q6PCD5 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.44□□□□□ -1.38
RFWD3Q6PCD5 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RFWD3Q6PCD5 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.44□□□□□ -1.38
RFWD3Q6PCD5 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.44□□□□□ -1.38
RFWD3Q6PCD5 AC119674.1-213ENST00000641177 1386 ntBASIC6.44□□□□□ -1.38
RFWD3Q6PCD5 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 AL353763.1-201ENST00000624467 1628 ntBASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 SNORA77.2-201ENST00000408571 112 ntBASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 RPS17P17-201ENST00000419392 409 ntBASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 PNKDP1-201ENST00000435914 430 ntBASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 AC023141.3-201ENST00000436698 278 ntBASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 RPL5P10-201ENST00000445207 894 ntBASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 Z83838.1-202ENST00000456225 839 ntBASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 RN7SKP70-201ENST00000516655 271 ntBASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 AC090888.3-201ENST00000558917 509 ntBASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 AC007346.1-201ENST00000569208 867 ntBASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 AC027229.1-201ENST00000583887 253 ntBASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RFWD3Q6PCD5 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 RNA5SP433-201ENST00000364491 114 ntBASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 CYP4F30P-202ENST00000420048 405 ntBASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 AC002069.1-201ENST00000429649 1159 ntBASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 IGLV3-4-201ENST00000432300 244 ntBASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 AC069154.1-201ENST00000432914 542 ntBASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 PPIAP7-201ENST00000454070 489 ntBASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 AP000620.1-201ENST00000527147 504 ntBASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 TOMM20P1-201ENST00000534518 427 ntBASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 AC007494.1-201ENST00000562293 760 ntBASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 SETP3-201ENST00000581726 813 ntBASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 AP001823.1-201ENST00000604056 1003 ntBASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 AC092681.3-201ENST00000609463 678 ntBASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 AC099654.11-201ENST00000638857 294 ntBASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 AL354854.1-201ENST00000455940 1363 ntBASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.42□□□□□ -1.38
RFWD3Q6PCD5 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms