Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RPL12P49-201ENST00000441100 121 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 CXCR2P1-202ENST00000443392 1074 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 AC234771.2-201ENST00000445718 597 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 VN1R48P-201ENST00000448149 1036 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 HSFY5P-201ENST00000453726 309 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 RN7SL104P-201ENST00000498686 293 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 SNX18P24-201ENST00000505249 671 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 AC112206.4-201ENST00000515142 405 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 AC078878.1-201ENST00000539832 958 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 MRPS21P9-201ENST00000571150 257 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 AC126365.2-201ENST00000580630 379 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 AC020916.2-201ENST00000591242 360 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 AC253576.2-201ENST00000618815 580 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 AL137067.2-201ENST00000621202 131 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 AL359742.1-201ENST00000622497 540 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 AL122023.1-201ENST00000622847 530 ntBASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.15□□□□□ -1.42
ZNF549Q6P9A3 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
ZNF549Q6P9A3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
ZNF549Q6P9A3 CCNT2P1-201ENST00000423082 1315 ntBASIC6.15□□□□□ -1.43
ZNF549Q6P9A3 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
ZNF549Q6P9A3 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.15□□□□□ -1.43
ZNF549Q6P9A3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.15□□□□□ -1.43
ZNF549Q6P9A3 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
ZNF549Q6P9A3 AC018717.1-201ENST00000457712 1505 ntBASIC6.15□□□□□ -1.43
ZNF549Q6P9A3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.15□□□□□ -1.43
ZNF549Q6P9A3 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 AC015977.1-201ENST00000418887 292 ntBASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 PPIAP10-201ENST00000438675 458 ntBASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 AC245291.3-201ENST00000443400 292 ntBASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 AP000547.1-201ENST00000454360 617 ntBASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 AC099670.1-201ENST00000455141 783 ntBASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 COL6A4P2-205ENST00000509855 506 ntBASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 AC087360.1-201ENST00000518788 616 ntBASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 OR7E158P-201ENST00000524483 910 ntBASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 CYCSP25-201ENST00000525280 316 ntBASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 EIF1AXP2-201ENST00000555940 413 ntBASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 SNORA74.4-201ENST00000607595 199 ntBASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 OR52B5P-204ENST00000641744 3467 ntBASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
ZNF549Q6P9A3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 LINC00328-2P-201ENST00000436585 219 ntBASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 POU5F1P5-201ENST00000445059 658 ntBASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 NFU1-207ENST00000462320 558 ntTSL 4 BASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 AL035690.1-201ENST00000490892 383 ntBASIC6.13□□□□□ -1.43
ZNF549Q6P9A3 SNRPCP11-201ENST00000492453 205 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms