Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 AC023245.1-201ENST00000468501 517 ntBASIC5.96□□□□□ -1.46
RIF1Q5UIP0 AL122020.1-201ENST00000472287 459 ntBASIC5.96□□□□□ -1.46
RIF1Q5UIP0 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 ULK4P2-202ENST00000564187 492 ntBASIC5.96□□□□□ -1.46
RIF1Q5UIP0 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.96□□□□□ -1.46
RIF1Q5UIP0 AC120057.5-201ENST00000623840 154 ntBASIC5.96□□□□□ -1.46
RIF1Q5UIP0 AC073488.2-201ENST00000631903 751 ntBASIC5.96□□□□□ -1.46
RIF1Q5UIP0 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 IL24-207ENST00000611909 1621 ntTSL 3 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 AL590762.1-201ENST00000391782 432 ntBASIC5.95□□□□□ -1.46
RIF1Q5UIP0 RNA5SP156-201ENST00000410250 110 ntBASIC5.95□□□□□ -1.46
RIF1Q5UIP0 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 ANKRD54P1-201ENST00000433115 471 ntBASIC5.95□□□□□ -1.46
RIF1Q5UIP0 RPS26P41-201ENST00000450370 284 ntBASIC5.95□□□□□ -1.46
RIF1Q5UIP0 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 AC008115.3-201ENST00000614874 549 ntBASIC5.95□□□□□ -1.46
RIF1Q5UIP0 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 NACA-203ENST00000454682 6629 ntTSL 5 BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RIF1Q5UIP0 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 PRELID3BP5-201ENST00000508612 460 ntBASIC5.94□□□□□ -1.46
RIF1Q5UIP0 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 AC096861.1-201ENST00000616652 240 ntBASIC5.94□□□□□ -1.46
RIF1Q5UIP0 AC005840.5-201ENST00000619166 599 ntBASIC5.94□□□□□ -1.46
RIF1Q5UIP0 MRPL57P1-201ENST00000621486 265 ntBASIC5.94□□□□□ -1.46
RIF1Q5UIP0 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 AC119674.1-201ENST00000641611 1210 ntBASIC5.94□□□□□ -1.46
RIF1Q5UIP0 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 AC015871.3-201ENST00000618835 2261 ntBASIC5.94□□□□□ -1.46
RIF1Q5UIP0 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 CLDN16-201ENST00000264734 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 AC010132.2-201ENST00000295493 1043 ntBASIC5.94□□□□□ -1.46
RIF1Q5UIP0 AC096537.2-201ENST00000413707 714 ntBASIC5.94□□□□□ -1.46
RIF1Q5UIP0 RPL7P61-201ENST00000451721 751 ntBASIC5.94□□□□□ -1.46
RIF1Q5UIP0 AC106800.3-201ENST00000511389 308 ntBASIC5.94□□□□□ -1.46
RIF1Q5UIP0 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 AC091768.1-201ENST00000609258 930 ntBASIC5.94□□□□□ -1.46
RIF1Q5UIP0 AC026951.1-201ENST00000559530 2459 ntBASIC5.94□□□□□ -1.46
RIF1Q5UIP0 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIF1Q5UIP0 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms