Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 C4BPAP2-201ENST00000428434 478 ntBASIC4.13□□□□□ -1.75
PRKDCP78527 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.13□□□□□ -1.75
PRKDCP78527 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.13□□□□□ -1.75
PRKDCP78527 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC4.13□□□□□ -1.75
PRKDCP78527 AC127070.3-201ENST00000503695 3263 ntBASIC4.13□□□□□ -1.75
PRKDCP78527 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC4.13□□□□□ -1.75
PRKDCP78527 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 ICK-202ENST00000356971 6227 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
PRKDCP78527 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC4.13□□□□□ -1.75
PRKDCP78527 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 AC241952.1-201ENST00000612480 6897 ntBASIC4.13□□□□□ -1.75
PRKDCP78527 MIPEPP2-201ENST00000422560 1819 ntBASIC4.13□□□□□ -1.75
PRKDCP78527 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.13□□□□□ -1.75
PRKDCP78527 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.13□□□□□ -1.75
PRKDCP78527 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PRKDCP78527 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.13□□□□□ -1.75
PRKDCP78527 CYCSP42-201ENST00000450823 238 ntBASIC4.13□□□□□ -1.75
PRKDCP78527 BLZF2P-201ENST00000553776 1130 ntBASIC4.13□□□□□ -1.75
PRKDCP78527 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.13□□□□□ -1.75
PRKDCP78527 WBP1LP8-201ENST00000617401 327 ntBASIC4.13□□□□□ -1.75
PRKDCP78527 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PRKDCP78527 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PRKDCP78527 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC4.12□□□□□ -1.75
PRKDCP78527 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.12□□□□□ -1.75
PRKDCP78527 IRF5P1-201ENST00000504852 2164 ntBASIC4.12□□□□□ -1.75
PRKDCP78527 LINC01630-208ENST00000635680 4363 ntTSL 5 BASIC4.12□□□□□ -1.75
PRKDCP78527 WDR36-206ENST00000612402 6592 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 RNA5SP211-201ENST00000365516 117 ntBASIC4.12□□□□□ -1.75
PRKDCP78527 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PRKDCP78527 SNORA37-201ENST00000384504 129 ntBASIC4.12□□□□□ -1.75
PRKDCP78527 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.12□□□□□ -1.75
PRKDCP78527 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.12□□□□□ -1.75
PRKDCP78527 AL513533.1-201ENST00000453728 415 ntBASIC4.12□□□□□ -1.75
PRKDCP78527 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.12□□□□□ -1.75
PRKDCP78527 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.12□□□□□ -1.75
PRKDCP78527 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.12□□□□□ -1.75
PRKDCP78527 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.12□□□□□ -1.75
PRKDCP78527 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.12□□□□□ -1.75
PRKDCP78527 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.12□□□□□ -1.75
PRKDCP78527 AC099654.6-201ENST00000636487 512 ntBASIC4.12□□□□□ -1.75
PRKDCP78527 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.12□□□□□ -1.75
PRKDCP78527 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC4.12□□□□□ -1.75
PRKDCP78527 ERBB3-203ENST00000415288 4353 ntTSL 2 BASIC4.12□□□□□ -1.75
PRKDCP78527 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PRKDCP78527 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.12□□□□□ -1.75
PRKDCP78527 NDUFA12P1-201ENST00000455914 406 ntBASIC4.12□□□□□ -1.75
PRKDCP78527 AC008629.2-201ENST00000503783 483 ntBASIC4.12□□□□□ -1.75
PRKDCP78527 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.12□□□□□ -1.75
PRKDCP78527 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.12□□□□□ -1.75
PRKDCP78527 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.12□□□□□ -1.75
PRKDCP78527 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 PTPRM-203ENST00000400060 5030 ntTSL 5 BASIC4.12□□□□□ -1.75
PRKDCP78527 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PRKDCP78527 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC4.12□□□□□ -1.75
PRKDCP78527 SLC25A16-207ENST00000609923 6529 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
PRKDCP78527 BACE1-202ENST00000392937 5155 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 RNU1-43P-201ENST00000365052 165 ntBASIC4.12□□□□□ -1.75
PRKDCP78527 RNA5SP44-201ENST00000410446 133 ntBASIC4.12□□□□□ -1.75
PRKDCP78527 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.12□□□□□ -1.75
PRKDCP78527 DNAJA1P6-201ENST00000437347 354 ntBASIC4.12□□□□□ -1.75
PRKDCP78527 PPM1AP1-201ENST00000502740 1135 ntBASIC4.12□□□□□ -1.75
PRKDCP78527 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC4.12□□□□□ -1.75
PRKDCP78527 PTTG3P-201ENST00000521862 606 ntBASIC4.12□□□□□ -1.75
PRKDCP78527 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.12□□□□□ -1.75
PRKDCP78527 AC233699.1-201ENST00000569955 1168 ntBASIC4.12□□□□□ -1.75
PRKDCP78527 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC4.12□□□□□ -1.75
PRKDCP78527 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.12□□□□□ -1.75
PRKDCP78527 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 RN7SKP23-201ENST00000625159 4301 ntBASIC4.12□□□□□ -1.75
PRKDCP78527 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 GOLGA8CP-201ENST00000446144 5237 ntBASIC4.12□□□□□ -1.75
PRKDCP78527 AL031123.3-201ENST00000623345 1837 ntBASIC4.12□□□□□ -1.75
PRKDCP78527 AC105114.1-201ENST00000624795 1862 ntBASIC4.12□□□□□ -1.75
PRKDCP78527 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PRKDCP78527 TECTA-202ENST00000392793 7426 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PRKDCP78527 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PRKDCP78527 AF131215.2-201ENST00000531549 1710 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms