Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HNF4AP41235 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HNF4AP41235 RNU6-1331P-201ENST00000363658 106 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 SNORA64.3-201ENST00000365647 134 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 MIR551B-201ENST00000384984 96 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HNF4AP41235 RNA5SP251-201ENST00000410614 137 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.16□□□□□ -1.42
HNF4AP41235 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.16□□□□□ -1.42
HNF4AP41235 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.16□□□□□ -1.42
HNF4AP41235 OR6R1P-201ENST00000431838 940 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC6.16□□□□□ -1.42
HNF4AP41235 AC128677.1-201ENST00000436016 442 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC6.16□□□□□ -1.42
HNF4AP41235 DNAJC19P5-201ENST00000443295 316 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 AC245291.3-201ENST00000443400 292 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 AC234771.2-201ENST00000445718 597 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 RARRES2P3-201ENST00000457739 473 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HNF4AP41235 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.16□□□□□ -1.42
HNF4AP41235 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HNF4AP41235 AC114324.2-202ENST00000503812 134 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 AC113398.2-201ENST00000507630 558 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.16□□□□□ -1.42
HNF4AP41235 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.16□□□□□ -1.42
HNF4AP41235 AP001804.1-201ENST00000526868 919 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6.16□□□□□ -1.42
HNF4AP41235 AC010615.3-201ENST00000597319 394 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 AC012368.3-201ENST00000604190 219 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 AL008723.3-201ENST00000608926 449 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 AL137246.2-201ENST00000613439 662 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 GAPDHP41-201ENST00000613707 975 ntBASIC6.16□□□□□ -1.42
HNF4AP41235 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HNF4AP41235 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.16□□□□□ -1.42
HNF4AP41235 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HNF4AP41235 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
HNF4AP41235 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HNF4AP41235 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.16□□□□□ -1.42
HNF4AP41235 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HNF4AP41235 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HNF4AP41235 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HNF4AP41235 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HNF4AP41235 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.16□□□□□ -1.42
HNF4AP41235 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
HNF4AP41235 AC020633.1-201ENST00000468439 2247 ntBASIC6.15□□□□□ -1.42
HNF4AP41235 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
HNF4AP41235 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HNF4AP41235 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.15□□□□□ -1.42
HNF4AP41235 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
HNF4AP41235 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HNF4AP41235 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HNF4AP41235 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
HNF4AP41235 RNA5SP485-201ENST00000365053 119 ntBASIC6.15□□□□□ -1.42
HNF4AP41235 RN7SKP186-201ENST00000365371 303 ntBASIC6.15□□□□□ -1.42
HNF4AP41235 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC6.15□□□□□ -1.42
HNF4AP41235 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.15□□□□□ -1.42
HNF4AP41235 PTP4A1P1-201ENST00000420539 515 ntBASIC6.15□□□□□ -1.42
HNF4AP41235 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
HNF4AP41235 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.15□□□□□ -1.42
HNF4AP41235 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.15□□□□□ -1.42
HNF4AP41235 UBE2V2P1-201ENST00000434717 398 ntBASIC6.15□□□□□ -1.42
HNF4AP41235 AL445991.1-201ENST00000450381 475 ntBASIC6.15□□□□□ -1.42
HNF4AP41235 AL359839.1-201ENST00000451975 1160 ntBASIC6.15□□□□□ -1.42
HNF4AP41235 SNRPCP11-201ENST00000492453 205 ntBASIC6.15□□□□□ -1.42
HNF4AP41235 AC018645.1-201ENST00000505003 109 ntBASIC6.15□□□□□ -1.42
HNF4AP41235 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.15□□□□□ -1.42
HNF4AP41235 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.15□□□□□ -1.42
HNF4AP41235 AC138517.1-201ENST00000515724 568 ntBASIC6.15□□□□□ -1.42
HNF4AP41235 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.15□□□□□ -1.42
HNF4AP41235 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.15□□□□□ -1.42
HNF4AP41235 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.15□□□□□ -1.42
HNF4AP41235 AL133399.1-201ENST00000527476 298 ntBASIC6.15□□□□□ -1.42
HNF4AP41235 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.15□□□□□ -1.42
HNF4AP41235 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.15□□□□□ -1.42
HNF4AP41235 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
HNF4AP41235 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.15□□□□□ -1.42
HNF4AP41235 TPRX1P1-201ENST00000557620 319 ntBASIC6.15□□□□□ -1.42
HNF4AP41235 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
HNF4AP41235 AP005901.4-201ENST00000577336 569 ntBASIC6.15□□□□□ -1.42
HNF4AP41235 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.15□□□□□ -1.42
HNF4AP41235 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.15□□□□□ -1.42
HNF4AP41235 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
HNF4AP41235 AC073869.7-201ENST00000640874 297 ntBASIC6.15□□□□□ -1.42
HNF4AP41235 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.15□□□□□ -1.42
HNF4AP41235 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.15□□□□□ -1.42
HNF4AP41235 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
HNF4AP41235 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
HNF4AP41235 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.15□□□□□ -1.43
HNF4AP41235 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
HNF4AP41235 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.15□□□□□ -1.43
HNF4AP41235 MTCO1P22-201ENST00000604619 1360 ntBASIC6.15□□□□□ -1.43
HNF4AP41235 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.15□□□□□ -1.43
HNF4AP41235 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.15□□□□□ -1.43
HNF4AP41235 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HNF4AP41235 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
HNF4AP41235 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
HNF4AP41235 BIN2P1-201ENST00000504996 1530 ntBASIC6.15□□□□□ -1.43
HNF4AP41235 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
HNF4AP41235 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.14□□□□□ -1.43
HNF4AP41235 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms