Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 WBP1LP12-201ENST00000604449 331 ntBASIC5.93□□□□□ -1.46
PTPN6P29350 AC011891.2-201ENST00000604949 397 ntBASIC5.93□□□□□ -1.46
PTPN6P29350 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.93□□□□□ -1.46
PTPN6P29350 MIR6780B-201ENST00000610307 79 ntBASIC5.93□□□□□ -1.46
PTPN6P29350 AC006924.1-201ENST00000610750 559 ntBASIC5.93□□□□□ -1.46
PTPN6P29350 AC116667.2-201ENST00000641075 823 ntBASIC5.93□□□□□ -1.46
PTPN6P29350 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN6P29350 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN6P29350 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PTPN6P29350 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
PTPN6P29350 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN6P29350 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
PTPN6P29350 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN6P29350 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN6P29350 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
PTPN6P29350 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN6P29350 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN6P29350 OR56A4-201ENST00000330728 1209 ntBASIC5.92□□□□□ -1.46
PTPN6P29350 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN6P29350 RN7SKP250-201ENST00000363924 321 ntBASIC5.92□□□□□ -1.46
PTPN6P29350 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
PTPN6P29350 RPL23AP17-201ENST00000401064 499 ntBASIC5.92□□□□□ -1.46
PTPN6P29350 AL360013.1-201ENST00000419031 858 ntBASIC5.92□□□□□ -1.46
PTPN6P29350 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.92□□□□□ -1.46
PTPN6P29350 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.92□□□□□ -1.46
PTPN6P29350 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.92□□□□□ -1.46
PTPN6P29350 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN6P29350 VPS25P1-201ENST00000455691 508 ntBASIC5.92□□□□□ -1.46
PTPN6P29350 AL445687.2-201ENST00000458156 728 ntBASIC5.92□□□□□ -1.46
PTPN6P29350 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.92□□□□□ -1.46
PTPN6P29350 RN7SL568P-201ENST00000493069 298 ntBASIC5.92□□□□□ -1.46
PTPN6P29350 AL117692.1-201ENST00000494283 713 ntBASIC5.92□□□□□ -1.46
PTPN6P29350 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN6P29350 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.92□□□□□ -1.46
PTPN6P29350 AC135983.3-201ENST00000528049 1226 ntBASIC5.92□□□□□ -1.46
PTPN6P29350 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.92□□□□□ -1.46
PTPN6P29350 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN6P29350 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.92□□□□□ -1.46
PTPN6P29350 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.92□□□□□ -1.46
PTPN6P29350 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN6P29350 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.92□□□□□ -1.46
PTPN6P29350 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.92□□□□□ -1.46
PTPN6P29350 GLYATL1P2-202ENST00000588046 902 ntBASIC5.92□□□□□ -1.46
PTPN6P29350 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.92□□□□□ -1.46
PTPN6P29350 AL589765.6-201ENST00000601909 549 ntBASIC5.92□□□□□ -1.46
PTPN6P29350 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.92□□□□□ -1.46
PTPN6P29350 AP000550.3-201ENST00000637734 379 ntBASIC5.92□□□□□ -1.46
PTPN6P29350 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PTPN6P29350 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN6P29350 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
PTPN6P29350 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN6P29350 CCNT2P1-201ENST00000423082 1315 ntBASIC5.92□□□□□ -1.46
PTPN6P29350 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN6P29350 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN6P29350 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN6P29350 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.92□□□□□ -1.46
PTPN6P29350 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN6P29350 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN6P29350 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN6P29350 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN6P29350 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN6P29350 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
PTPN6P29350 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN6P29350 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN6P29350 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN6P29350 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
PTPN6P29350 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN6P29350 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.91□□□□□ -1.46
PTPN6P29350 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN6P29350 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN6P29350 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
PTPN6P29350 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN6P29350 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.91□□□□□ -1.46
PTPN6P29350 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.91□□□□□ -1.46
PTPN6P29350 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN6P29350 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN6P29350 RNA5SP485-201ENST00000365053 119 ntBASIC5.91□□□□□ -1.46
PTPN6P29350 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.91□□□□□ -1.46
PTPN6P29350 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN6P29350 PRELID1P1-201ENST00000403549 660 ntBASIC5.91□□□□□ -1.46
PTPN6P29350 THEM7P-201ENST00000419556 672 ntBASIC5.91□□□□□ -1.46
PTPN6P29350 AC016027.5-201ENST00000427227 210 ntBASIC5.91□□□□□ -1.46
PTPN6P29350 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.91□□□□□ -1.46
PTPN6P29350 RPL7L1P3-201ENST00000455249 689 ntBASIC5.91□□□□□ -1.46
PTPN6P29350 RN7SL39P-201ENST00000462264 297 ntBASIC5.91□□□□□ -1.46
PTPN6P29350 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.91□□□□□ -1.46
PTPN6P29350 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.91□□□□□ -1.46
PTPN6P29350 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.91□□□□□ -1.46
PTPN6P29350 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.91□□□□□ -1.46
PTPN6P29350 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.91□□□□□ -1.46
PTPN6P29350 CYP4F27P-201ENST00000514557 494 ntBASIC5.91□□□□□ -1.46
PTPN6P29350 IGHV4-55-201ENST00000520889 368 ntBASIC5.91□□□□□ -1.46
PTPN6P29350 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.91□□□□□ -1.46
PTPN6P29350 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
PTPN6P29350 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.91□□□□□ -1.46
PTPN6P29350 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.91□□□□□ -1.46
PTPN6P29350 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.91□□□□□ -1.46
PTPN6P29350 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.91□□□□□ -1.46
PTPN6P29350 AL583832.1-201ENST00000603227 784 ntBASIC5.91□□□□□ -1.46
PTPN6P29350 AC012676.3-201ENST00000614983 479 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms