Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC011447.2-201ENST00000592921 283 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 BNIP3P24-201ENST00000593398 557 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC8.14□□□□□ -1.11
ERCC3P19447 PCNAP1-202ENST00000595299 752 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC8.14□□□□□ -1.11
ERCC3P19447 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC8.14□□□□□ -1.11
ERCC3P19447 FRG1EP-201ENST00000634469 770 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
ERCC3P19447 AL596275.2-207ENST00000641188 675 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 AC020978.6-201ENST00000571197 3177 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ERCC3P19447 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC8.14□□□□□ -1.11
ERCC3P19447 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC8.14□□□□□ -1.11
ERCC3P19447 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
ERCC3P19447 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
ERCC3P19447 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC8.14□□□□□ -1.11
ERCC3P19447 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ERCC3P19447 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC8.14□□□□□ -1.11
ERCC3P19447 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ERCC3P19447 BX284613.1-201ENST00000452221 1641 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC8.14□□□□□ -1.11
ERCC3P19447 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC8.14□□□□□ -1.11
ERCC3P19447 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
ERCC3P19447 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
ERCC3P19447 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC8.13□□□□□ -1.11
ERCC3P19447 AC091544.5-201ENST00000620192 3815 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
ERCC3P19447 UG0898H09-202ENST00000623646 7040 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC8.13□□□□□ -1.11
ERCC3P19447 LRRC37A12P-201ENST00000454917 1801 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC8.13□□□□□ -1.11
ERCC3P19447 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC8.13□□□□□ -1.11
ERCC3P19447 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
ERCC3P19447 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
ERCC3P19447 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ERCC3P19447 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
ERCC3P19447 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
ERCC3P19447 RGS5-202ENST00000367903 934 ntTSL 3 BASIC8.13□□□□□ -1.11
ERCC3P19447 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
ERCC3P19447 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
ERCC3P19447 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ERCC3P19447 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC8.13□□□□□ -1.11
ERCC3P19447 SNORD116-12-201ENST00000384468 92 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 AL079341.1-201ENST00000404701 1207 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 RNU4-74P-201ENST00000411280 161 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 TMA16P2-201ENST00000413187 601 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC8.13□□□□□ -1.11
ERCC3P19447 AL365338.1-201ENST00000422282 858 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC8.13□□□□□ -1.11
ERCC3P19447 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC8.13□□□□□ -1.11
ERCC3P19447 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
ERCC3P19447 TRBV29OR9-2-201ENST00000427589 333 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 GTF2IP3-201ENST00000433887 494 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 E2F6P3-201ENST00000441743 743 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC8.13□□□□□ -1.11
ERCC3P19447 RPL23AP8-201ENST00000479812 475 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 AC025459.1-201ENST00000504072 156 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC8.13□□□□□ -1.11
ERCC3P19447 IGLVVII-41-1-201ENST00000518405 151 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC8.13□□□□□ -1.11
ERCC3P19447 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC8.13□□□□□ -1.11
ERCC3P19447 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC8.13□□□□□ -1.11
ERCC3P19447 AL049870.4-201ENST00000555741 486 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC8.13□□□□□ -1.11
ERCC3P19447 AL356801.1-201ENST00000559320 294 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC8.13□□□□□ -1.11
ERCC3P19447 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC8.13□□□□□ -1.11
ERCC3P19447 MIR378C-201ENST00000578683 81 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 RPS4XP21-201ENST00000603814 750 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 AC018618.2-201ENST00000604770 446 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 AC019257.2-201ENST00000605539 497 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
ERCC3P19447 AC013470.4-201ENST00000619978 986 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
ERCC3P19447 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
ERCC3P19447 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
ERCC3P19447 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
ERCC3P19447 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC8.13□□□□□ -1.11
ERCC3P19447 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
ERCC3P19447 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC8.13□□□□□ -1.11
ERCC3P19447 Z93929.1-201ENST00000418200 1475 ntBASIC8.13□□□□□ -1.11
ERCC3P19447 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC8.13□□□□□ -1.11
ERCC3P19447 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
ERCC3P19447 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
ERCC3P19447 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC8.12□□□□□ -1.11
ERCC3P19447 CUBNP3-201ENST00000457461 1784 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
ERCC3P19447 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
ERCC3P19447 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ERCC3P19447 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.12□□□□□ -1.11
ERCC3P19447 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC8.12□□□□□ -1.11
ERCC3P19447 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ERCC3P19447 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC8.12□□□□□ -1.11
ERCC3P19447 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ERCC3P19447 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ERCC3P19447 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ERCC3P19447 AC122713.2-201ENST00000624942 3335 ntBASIC8.12□□□□□ -1.11
ERCC3P19447 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
ERCC3P19447 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
ERCC3P19447 MAPK10-270ENST00000641102 3538 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms