Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 FAM122C-201ENST00000370784 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.54□□□□□ -1.36
ATF4P18848 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC6.54□□□□□ -1.36
ATF4P18848 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
ATF4P18848 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.54□□□□□ -1.36
ATF4P18848 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ATF4P18848 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 RBMS1-204ENST00000409289 1490 ntTSL 5 BASIC6.53□□□□□ -1.36
ATF4P18848 CYP2G2P-201ENST00000594920 1485 ntBASIC6.53□□□□□ -1.36
ATF4P18848 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.53□□□□□ -1.36
ATF4P18848 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 LDHB-201ENST00000350669 1303 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 AC011447.7-201ENST00000624228 1590 ntBASIC6.53□□□□□ -1.36
ATF4P18848 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 AC022031.1-201ENST00000585985 2593 ntBASIC6.53□□□□□ -1.36
ATF4P18848 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.53□□□□□ -1.36
ATF4P18848 AL139384.2-201ENST00000613809 3590 ntBASIC6.53□□□□□ -1.36
ATF4P18848 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.53□□□□□ -1.36
ATF4P18848 ST3GAL3-211ENST00000361812 513 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 RNA5SP74-201ENST00000363538 109 ntBASIC6.53□□□□□ -1.36
ATF4P18848 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC6.53□□□□□ -1.36
ATF4P18848 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
ATF4P18848 CENPW-202ENST00000368326 443 ntTSL 2 BASIC6.53□□□□□ -1.36
ATF4P18848 GSTA5-202ENST00000370989 892 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.53□□□□□ -1.36
ATF4P18848 Y_RNA.505-201ENST00000384489 102 ntBASIC6.53□□□□□ -1.36
ATF4P18848 COX6B1-202ENST00000392201 435 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
ATF4P18848 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC6.53□□□□□ -1.36
ATF4P18848 RPL23AP47-201ENST00000408017 460 ntBASIC6.53□□□□□ -1.36
ATF4P18848 RN7SKP154-201ENST00000410136 290 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AL390774.1-201ENST00000411924 246 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.53□□□□□ -1.36
ATF4P18848 ZNF736P2Y-201ENST00000416040 1279 ntBASIC6.53□□□□□ -1.36
ATF4P18848 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 AC234782.4-201ENST00000417646 1048 ntBASIC6.53□□□□□ -1.36
ATF4P18848 RNGTTP1-201ENST00000420965 728 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC6.53□□□□□ -1.36
ATF4P18848 ARHGEF7-IT1-201ENST00000423329 804 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 AC012519.1-201ENST00000424588 610 ntBASIC6.53□□□□□ -1.36
ATF4P18848 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ATF4P18848 AC152007.1-201ENST00000428521 224 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AP000936.3-201ENST00000438127 255 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AC097358.1-201ENST00000438827 582 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AL353754.1-201ENST00000440219 340 ntBASIC6.53□□□□□ -1.36
ATF4P18848 RPS19P6-201ENST00000441327 433 ntBASIC6.53□□□□□ -1.36
ATF4P18848 LINC02022-201ENST00000448129 635 ntTSL 2 BASIC6.53□□□□□ -1.36
ATF4P18848 AC104389.2-201ENST00000450768 887 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC6.53□□□□□ -1.36
ATF4P18848 RPSAP64-201ENST00000451820 336 ntBASIC6.53□□□□□ -1.36
ATF4P18848 DDX39BP2-208ENST00000453923 258 ntBASIC6.53□□□□□ -1.36
ATF4P18848 TUBB4BP2-201ENST00000454125 798 ntBASIC6.53□□□□□ -1.36
ATF4P18848 NDUFA12P1-201ENST00000455914 406 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC6.53□□□□□ -1.36
ATF4P18848 RPL37P3-201ENST00000456825 293 ntBASIC6.53□□□□□ -1.36
ATF4P18848 RPS20P23-201ENST00000461683 354 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AP001318.1-201ENST00000476981 321 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AC068531.1-201ENST00000502398 195 ntBASIC6.53□□□□□ -1.36
ATF4P18848 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC6.53□□□□□ -1.36
ATF4P18848 LAMTOR3P2-201ENST00000504479 232 ntBASIC6.53□□□□□ -1.36
ATF4P18848 LINC01184-206ENST00000508878 968 ntTSL 5 BASIC6.53□□□□□ -1.36
ATF4P18848 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
ATF4P18848 AC091951.4-201ENST00000512746 332 ntTSL 5 BASIC6.53□□□□□ -1.36
ATF4P18848 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
ATF4P18848 AC098679.2-201ENST00000513067 365 ntTSL 2 BASIC6.53□□□□□ -1.36
ATF4P18848 AC107220.1-201ENST00000514347 1037 ntTSL 3 BASIC6.53□□□□□ -1.36
ATF4P18848 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC6.53□□□□□ -1.36
ATF4P18848 RPL10P9-201ENST00000522551 645 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AC091939.1-201ENST00000522704 691 ntTSL 3 BASIC6.53□□□□□ -1.36
ATF4P18848 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.53□□□□□ -1.36
ATF4P18848 SMARCE1P4-201ENST00000523647 241 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AP001207.1-201ENST00000524051 481 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AC109635.2-202ENST00000529219 500 ntTSL 3 BASIC6.53□□□□□ -1.36
ATF4P18848 PDCL3P1-201ENST00000534575 734 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AC007115.1-201ENST00000546853 234 ntBASIC6.53□□□□□ -1.36
ATF4P18848 CHURC1-202ENST00000548752 439 ntTSL 2 BASIC6.53□□□□□ -1.36
ATF4P18848 AC004217.3-201ENST00000551552 878 ntBASIC6.53□□□□□ -1.36
ATF4P18848 LINGO1-AS1-202ENST00000558887 1124 ntTSL 2 BASIC6.53□□□□□ -1.36
ATF4P18848 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.53□□□□□ -1.36
ATF4P18848 FRG2HP-201ENST00000568807 832 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AC040162.2-201ENST00000573092 157 ntBASIC6.53□□□□□ -1.36
ATF4P18848 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC6.53□□□□□ -1.36
ATF4P18848 AC008649.2-201ENST00000585999 242 ntTSL 5 BASIC6.53□□□□□ -1.36
ATF4P18848 ZNF525-206ENST00000593918 590 ntTSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms